Cajanus cajan (pigeon pea): 109798291
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Entry
109798291 CDS
T04868
Name
(RefSeq) AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccaj03400
]
109798291
DNA repair and recombination proteins [BR:
ccaj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
109798291
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
Motif
Other DBs
NCBI-GeneID:
109798291
NCBI-ProteinID:
XP_029127151
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Position
4:4643637..4648803
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AA seq
1107 aa
AA seq
DB search
MAEKAAAPPPSKPLTVQEWETLIDDFQNGVHLKWNSLDPLFDLLLPSLLRKDFPLSLKLQ
LLIFLDEFSLSFFSNHHQLHRLVDALRTVVHAPPDVAASTFKDQFMVSATSILICASEEI
AVEAQTENILVELLLTVINRPNYGSDRHTRGIACECLRELERWKPGLLSDVVGHLWSLCQ
NERTHASQCYLLLFTSVIHSIVARKLSVSILNTSVPIVPFNAPQCVTDSGSGSGSGSDLG
SGLNVKELRRAMAFLLEWPQVMTPCGMMEFVSMIIPVAVALELQPSMLKVQFFGMIHSYD
PILCHVVLSMYLRFSDAFDGQEGEVSRRLLLISREAQHYLVFRLLAMHWLLGFNRLVFEK
AKPSLVLCSTFYPALFDPLALKALKLDLLVFCSCVLRLKGDSDELVDPVKLFEDGLVCVS
SFKWLPPGSTETAVAFRTFHKFLIASSSHSDDDPSTTRNLLDSMIFRTLQGLLVNLMLES
RRLVPVVVAFVDRLLSCQKHSWLGECLLQKFDEHLLPKVRMDYKLVYCFPIFDRIAENQT
IPPRGLLELLTNFMIFLVEKHGPDTGMKSWSQGSRALGICRTMLMHHHSSRLFLRLSHLL
AFTCLYFPDLEVRDNSRIYLRMLVCIPGKKLRDILNLGDMILGISPSSHPTSFFNVQSPR
PSQKFKTFKNLSSCIHLERFVPLLVKQFWSMSLSNLVRSNSKPAYLEGIRDLDPPVEEKE
LSDSSDAQIIPETGRINQPQEPLRVMDSKVAEILNTLRKYFSCVPDFRYMPGLKVRISCS
LRFESSSFNRMLGIDKTATSLEEIDALPAIYATVLKFSSSAPYGSIPSYRIPFLLGEPHN
KDPASQNASLSIVPVGVENDSREEEKYRATVVIDLEPREPTPGIVDVHIETNAENGQIIQ
GQLQGITVGIEDMFLKAIVPSDIPEDEIPRYNFDLFNTLWEACGSSSSTGRETFQLKGGK
GIAAISGTQSVKLLDVPATSLIQATERHLARFVVGVSGEPLIDAIWEGGIIQNVILEDAS
PDATSATNHDTAPLCLTYNDEGYEKGAISNSRKRNLGCLHVLIFLPPRFHLLFQMEVGDV
STLVRIRTDHWPSLAYIDDYLEALYLS
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaaagcggcggcgccaccaccgtcgaagcctctgacagttcaggagtgggaa
accctaatcgatgacttccagaacggcgtccacctcaagtggaactcactggatcctctc
ttcgatctccttctcccctctcttctccgcaaggacttccctctctccctcaagctccag
cttctcatattcctcgacgaattctccctctccttcttctccaaccaccaccaactccac
cgtctcgttgacgcgctcagaaccgtcgtccacgcgcctcccgatgtcgccgcttccacc
ttcaaagaccagttcatggtttccgccacctcgattctcatctgcgcgtcggaggagatc
gcggtcgaggcgcagacggagaatattctggtggagttgttgctgacggttataaaccga
ccgaattacggttcggaccggcacacacgtggcatcgcgtgcgaatgcctgagggaattg
gagcggtggaaacctggtttgctttccgatgtggttggacacttgtggagtctctgccag
aacgagcgaactcacgcttctcagtgctatctgttgctcttcacttcggtgattcacagc
atcgtcgctcggaaactcagcgtctccattctcaacacttccgttccgattgttcctttc
aatgcgccgcagtgcgtgacggattcgggttcgggttcgggttcaggctcggatttaggt
tcgggtttgaatgtgaaggagttaaggagggcgatggcgtttttgctggagtggccgcaa
gtgatgactccttgcgggatgatggagtttgtgtctatgataattcccgtggctgtggcg
ttggaactgcaaccttccatgctgaaggtgcagttcttcgggatgattcattcgtatgat
cctattctgtgccatgtcgttttgagcatgtatttgcgtttctcggatgcgtttgatggt
caagagggagaggtttctcgcaggcttttgttgatttcgagagaggctcagcattatttg
gtgtttcgcttgttggctatgcactggttgttgggtttcaatcgattggttttcgagaag
gcgaagccctctcttgtattgtgctccaccttttacccggctctgtttgatcctctggct
ttgaaagccttgaagcttgaccttcttgtgttttgctcttgtgtcttgaggctgaaaggt
gattctgatgagttggttgatccggtgaagctgtttgaagatggtcttgtttgtgtctct
tccttcaaatggttgcctcccgggagcacagagaccgcagttgcgtttcgcacctttcat
aagtttttgatcgcttcgtcctctcattccgatgatgatccttccaccacaaggaatctg
ttggactccatgatatttcgcactttgcagggtttgcttgtgaacttgatgttggagagt
aggagattggttcctgttgtcgttgcttttgttgaccgtttgctctcctgtcaaaagcat
tcttggttgggtgagtgcttacttcagaaatttgatgagcacttgcttccaaaagtgaga
atggattataagttggtttattgcttcccaatatttgatagaattgctgaaaatcagaca
atacctcctcgtggattgttagagctgctcaccaacttcatgattttccttgtggagaaa
catggcccagatacagggatgaaatcttggtcccagggaagtagagctcttgggatttgc
cgaactatgttgatgcaccatcatagctctagattgttccttagactatctcatctactt
gctttcacatgtctctattttcctgatttggaggttcgtgataattcaaggatctacttg
cgaatgctggtctgcattccagggaagaagcttagagacattctgaacctgggagatatg
attcttggaatttcaccatcttcacacccaacctcatttttcaacgttcagtcacctaga
ccttctcagaaattcaagacatttaaaaacttatcatcctgtattcaccttgagcgtttt
gtcccattgctagtcaaacaattttggtctatgtcattgtcaaatttagttcgaagtaac
agtaaacctgcttatctggagggcatcagagatcttgacccccctgttgaggaaaaggaa
ttgtctgacagttccgatgcacagatcatccctgaaactggaagaataaatcaaccacaa
gagccactccgtgttatggattctaaagttgcagaaattttgaacacattaaggaagtac
ttttcctgtgttccggacttcagatatatgccaggtctaaaagttagaatatcatgcagt
ttgaggtttgaatctagtagtttcaatcgcatgttgggaatagataaaactgccacatcc
ttggaagagattgatgcacttcctgctatatatgctactgtgttaaaattttcgtcatct
gcaccatatgggtcaattccatcttatcgtataccttttcttctcggtgaacctcacaat
aaagatcctgcatctcaaaatgcctccctaagtattgttcctgtcggtgttgaaaatgat
tccagggaagaggaaaaatatagagctactgttgtgattgatttggagcccagagaaccc
acaccaggtatagttgatgttcacattgaaacaaatgcagaaaatggtcaaatcatccaa
ggtcaacttcaaggaattacagtaggcatagaagacatgtttctcaaggctattgtcccg
tcagacatcccagaagatgaaatacctcgatacaactttgacttgttcaatactttatgg
gaggcatgtggctcatcctccagcactggccgggagacctttcaattgaaagggggcaaa
gggattgctgccattagtggaactcaatctgtcaagcttcttgatgtacctgcaacctct
ttgatccaggcaactgagcgccatctggcacgctttgttgtaggtgtgagtggggagcca
cttattgatgccatatgggaagggggaatcattcagaacgtcattttggaagatgcttct
cctgatgctacttctgctactaatcacgatacagctccactctgtcttacttacaatgat
gaagggtatgagaagggggctattagcaatagcagaaaaagaaacctgggttgtttgcat
gttttaatatttcttcctccacggttccatctccttttccaaatggaagttggtgatgtt
tcaactttagttcgcattcgtacagaccactggcccagcttagcttacattgatgattat
ttagaagctttgtatctgtcataa
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