Cajanus cajan (pigeon pea): 109798361
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Entry
109798361 CDS
T04868
Name
(RefSeq) coatomer subunit alpha-2
KO
K05236
coatomer subunit alpha
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccaj04131
]
109798361
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccaj04147
]
109798361
Membrane trafficking [BR:
ccaj04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
109798361
Exosome [BR:
ccaj04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
109798361
Exosomal proteins of bladder cancer cells
109798361
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
EIF3I
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
TPR_COPA_B
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_WDR41
Beta-prop_IFT122_1st
WD40_RFWD3
NBCH_WD40
Beta-prop_Aladin
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_At4g14310
BPL_LplA_LipB_2
Motif
Other DBs
NCBI-GeneID:
109798361
NCBI-ProteinID:
XP_020214182
LinkDB
All DBs
Position
4:3636703..3642306
Genome browser
AA seq
1221 aa
AA seq
DB search
MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH
NSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHPKEDIVVSASLDQTVRVWDIGSLKRKAGPPADDILR
LSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNDTKAWE
VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWILSTHP
EMNLLAAGHDSGMIVFKLERERPAFAVSGDSLFYTKDRFLRFYEFSTQRETQVLTIRRPG
SSSLNQSPKTLSYSPSENAILLCSDVDGGSYELYCISKDGTKDSFGRGDMQDPKKGLGGS
AVFVARNRFAVLDKGSNQVSVKNLKNDIVKKSALPIAADAIFYAGTGNLLCRSEDRVFIF
DLQQRIVLGDLQTPFIKYVVWSNDMESVALLSKHAIVIASKKLVHQCTLHETIRVKSGAW
DDNGIFIYTTLNHIKYCLPNGDSGIIKTLDVPIYITKVVGNTIFCLGRDGKNKAITIDAT
EYIFKLSLLKKRYDHVMNMIRNSQLCGQAMIAYLQQKGFPEVALHFVKDERIRFNLALES
GNIQIAVASATAIDEKDHWYRLGVEALRQGNSGIVEYAYQRTKNFERLSFLYLITGNVEK
LSKMLKIAEVKNDVMGQFHNALYMGDIRERVKILENAGHLPLAYVTASIHGLHDVAERLA
AELGDNVPSLPEGKQQSLLMPPSPVLCGGDWPLLRVMRGIFDGGFNNTDRDADDEEYEAA
DGDWGEELDMVDVDGLQNGDVAAILDGVDVAEEDDEEGGWELEDLELPPEADTPKVSVSS
RSSVFVAPTPGMAVSQIWVQRSSLAADHVAAGNFDTAMRLLNRQLGIKNFDPLKSLFLDL
HTGSHSYLRAFSSAPVVSIAVERGWTESSSPNVRGPPALPFRLSQLDEKLKAGYKSTTAG
KFTDALRTFVNILHTIPLIVVESRREVDDVKELIIIVKEYVLGLQMELKRREIKDNPARQ
LELAAYFTHCNLQPPHLRLALLNAMTVCYKAKNLATAANFARRLLETNPTVENQAKTARQ
VLAAAERNMTDAIQLNYDFRNPFVICGATYEPIYRGQKDVSCPYCTSRFVPNQEGQLCAV
CDLSVVGADASGLLCSPSQIR
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atgctgacaaagttcgagaccaagagtaatagagtgaagggactcagtttccacagcaag
agaccgtggatcctcgcgagtcttcacagtggcgtgatccagctatgggattaccgaatg
ggaaccctaattgacagattcgatgagcacgatggacctgtcagaggtgttcatttccat
aattcgcagcctctctttgtctctggaggggatgattacaagattaaggtttggaactat
aagatgcataggtgtttgttcactcttctaggacaccttgattatatccgtactgtgcaa
tttcatcatgagaacccgtggattgtgagtgccagtgatgatcagaccattcgcatttgg
aactggcagtcacgtacctgtatatctgttttaactgggcacaatcattatgtcatgtgt
gcttcgttccacccaaaagaggatattgttgtgtcagcctccctggaccagactgttcgt
gtttgggatattggttctctcaaaaggaaggctgggcctcctgcagatgacattctacga
ttgagtcagatgaacacagatctttttggaggtgttgatgcagttgttaagtatgtatta
gaaggtcatgaccggggtgtcaactgggctgcttttcatcctacactgcctctcattgtc
tcaggagctgatgaccgacaagtgaaactttggaggatgaatgacactaaggcatgggaa
gtggatactttgagagggcacatgaataatgtttcatgtgttatgttccatgccaaacag
gacatcattgtttcaaattctgaggataaaagtattcgagtatgggatgccacaaagcgg
actggaattcaaactttccgcagagagcatgatcggttttggattctttctacacatcct
gaaatgaatttgttggcagctggtcatgacagtggcatgatagtctttaagctagagaga
gaaaggcccgcttttgcagttagtggtgattctttattctacacaaaagaccgattcttg
cgtttctatgaattttcaactcagagagagacacaagtacttacaattcgacgacctggt
tcttcaagtctgaatcaaagtcccaagactctttcctacagcccttccgaaaatgcaatt
cttctctgttcagatgtggatgggggatcttatgagttgtattgcatatcgaaagatggg
acaaaggacagttttggtaggggtgatatgcaagatccaaagaaaggtcttggagggtct
gcagtctttgtggctcggaataggtttgcggtgcttgacaaaggcagtaaccaagtctct
gttaaaaatctgaagaatgatattgtcaaaaagagtgcccttccgattgcggctgatgct
atattctatgctggaacaggcaacttgctatgtaggtcagaggatagggtttttatattt
gatctacagcagaggattgttctcggtgatcttcagaccccttttataaagtatgttgtc
tggtctaatgacatggaaagtgttgctctgctcagtaaacatgcgattgtcattgctagc
aagaagcttgtgcaccaatgcacccttcatgagactatccgagtaaaaagtggagcctgg
gatgacaacggtatttttatttacacaacattaaatcatatcaaatactgcctccccaat
ggagatagtgggataataaaaacacttgatgtcccaatttatatcacaaaggttgttgga
aacaccatcttttgcttgggtcgggatgggaaaaacaaggctataactattgatgcaaca
gaatatatctttaagctttccttgttgaagaaacgatatgaccatgttatgaacatgata
aggaattcacagctttgtggacaggctatgattgcttatctacaacagaaagggtttcca
gaagttgccctccattttgtgaaagatgagagaattcgattcaatttggctttggagagt
ggcaacattcaaattgcagttgcatcagcaacggcaattgatgaaaaagatcactggtat
cggttaggggttgaagctcttcgtcaaggcaactctggtatagtagagtatgcataccag
aggactaaaaattttgagagactgtcattcctttatctcattactggtaatgtggaaaaa
ctttcaaaaatgttgaaaattgctgaagtgaagaatgatgtgatgggccagtttcacaat
gccctatatatgggtgacatcagagagcgtgttaagatcttggagaatgcgggacatttg
cctcttgcttatgtcactgcatcaatccatgggctacatgatgttgctgaaaggcttgca
gctgaactgggggataatgttccatctttgcccgaaggaaaacaacaatctctcttgatg
ccgccatcacctgttttgtgtggtggtgattggccccttcttagggtcatgcggggaata
tttgatggtggttttaataatacagatcgagatgcagatgatgaagagtatgaggctgct
gatggtgattggggtgaggagcttgacatggttgatgtagatggcttacaaaatggagat
gttgctgcaatcttggatggtgtggatgtggctgaagaggatgacgaagaaggtggatgg
gagctggaagatttagagcttccccctgaagctgacacaccaaaagtttccgtcagttca
cgatcttcagtttttgtggccccaacacctgggatggcagttagccagatatgggttcag
agatcatcacttgcagctgatcatgtagctgctggcaattttgatactgcaatgagatta
ttgaacaggcaacttgggataaagaactttgaccccttgaaatctttgttcctagatctc
catactggcagtcattcctatctgcgtgccttttcatctgctccggttgtatcaattgct
gttgaaagaggctggactgagtcatctagtccaaatgtaagaggtccacctgcacttcct
ttcagattgtctcaattagatgaaaaactcaaagctggttataagtcaacaacagctggg
aaatttactgatgctcttcgcacttttgtcaatattcttcacacaattcctttgattgtt
gttgagtcaaggagggaggttgatgatgtgaaagaactcattatcatagtgaaagaatat
gttttgggtctgcagatggagctgaaacgaagggaaattaaagacaatccagcacgccag
ctagagcttgcagcttacttcacccactgcaatcttcagccacctcacttgaggctagct
ttgctgaatgccatgactgtctgctacaaggcaaagaaccttgctacggctgctaacttt
gccaggaggctacttgagaccaatcctaccgttgaaaaccaagccaagacagcaaggcaa
gtgctggcagctgctgaaaggaatatgactgatgccatacagttgaactacgattttcgg
aatccatttgtaatttgtggagcaacctatgagcctatttatcgtggacagaaggatgtc
tcttgcccatattgtacttcccgttttgtgccaaaccaagaagggcagctatgtgctgtg
tgtgatctttcagtggtaggggctgatgcttctggattgctctgctctccttcccagatt
cgttga
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integrated database retrieval system