Cajanus cajan (pigeon pea): 109798401
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Entry
109798401 CDS
T04868
Name
(RefSeq) protein argonaute 5
KO
K11593
eukaryotic translation initiation factor 2C
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccaj03019
]
109798401
03036 Chromosome and associated proteins [BR:
ccaj03036
]
109798401
Messenger RNA biogenesis [BR:
ccaj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
109798401
Chromosome and associated proteins [BR:
ccaj03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
109798401
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
109798401
microRNA pathway
RISC loading complex
109798401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Piwi_N
Motif
Other DBs
NCBI-GeneID:
109798401
NCBI-ProteinID:
XP_020214248
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Position
4:7176874..7182985
Genome browser
AA seq
965 aa
AA seq
DB search
MSRRSGASKQSQPSPVPSHAGRGRGRGQNPTVAAAAAAPPPPPSPNAPAVTAPPPPRSAA
APSPVNAPPSTAPATAASSSTAVESLSSVVEKQLTLAAPSSARAYRIPDRPGYGKAGRRI
QVRANHFQVQVAERDLYHYDVSFKPEIISKYVCRKVISLLIQMHRESMLGNSIPAYDGRK
SLFSAGPFPFESKDFMIKLEDDDESGSSTAPAKTKRVREYKVTIRFASKTDVHHLNQFLK
RRQLDCPYETIQALDVVLRATPTEMYNVVGRLFYHPSLGRTGTLGSGTEYWRGYYQSLRP
TQMGLSLNIDVSANAYYEPIPVIHFINKHFNFDIRRPLSDQARVKIRKSLKGVRVECNHG
QNIRRYRVAGVTKESLKDLTFLDGNGTKKSVVEYFHEQYNIMFQYLSLPALQAGSDTKPI
YLPMEVCHIVAGQRYTKRLNEEQVSALLKATCQRPRERENNIKQVVRQSNFNADQIVRQF
GIQVRGDPALIDARVLTPPMLLYHQSGKESRVEPRMGQWNMIDKKMIKGGNVQYWTCLNL
SMNISDDMAGKFCDQLAVMCTTKGMQFNRTPLLRVTHGQPNQVENVLVNLNKQCMSKLAN
TNGRLQLLIIILPDVKGSYGKIKRICETELGIVSQCCQPRQIVKSSNKQYLENVALKINV
KVGGSNTVLNDAIAKQIPHVSDKATLILGADVTHPQPGEDSSPSIAAVVGCMDWPFVTKY
RGVVSAQPHREEIIQDLFKSYHDPNRGAVYSGIIRDLLMAFRRSTNMKPDRIIFYRDGVS
EGQFSQVLLHEMDAIRKACGSLQAEYFPPVTFVVVQKRHHTRLFPFEHERRDQTDRSGNI
MPGTVVDTSICHPREFDFYLNSHAGIQGTSRPTHYHVLYDENNFTADELQNFTNSLCYTY
ARCTRSVSIVPPAYYAHLAAFRARYYIEGQLSDADSSTETGGRRANFQVVLPSVKDNVAD
VMFFC
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtcgcagcggtgcctctaagcaatctcaaccgtctccggtgccgtcgcatgcc
gggagaggacgcggccgcggacaaaatcctaccgtcgccgccgccgccgccgctcctcct
cctcctccatcaccgaatgcgccagcggtaaccgcgcctcctccgcctcgctccgccgcg
gcaccttctccggtgaatgctccaccgtcgacggctcctgctactgccgcgtcatcgtcc
acggcggtggagtcgctgagttccgtggtggagaagcagctgactctggcggcgccgtcg
tcggcgagggcttaccggatccctgaccggccgggctacggcaaagcgggacggagaatt
caagttcgtgcgaatcactttcaagttcaagtcgctgagcgggatctttatcattatgat
gtatccttcaaacctgagatcatctccaagtacgtgtgcaggaaggttattagtttactg
attcaaatgcaccgggagtctatgttgggaaatagcataccagcgtatgatgggcgaaag
agtctattttctgcaggaccctttcctttcgagtccaaggattttatgatcaagttggaa
gacgacgatgaaagtggctcttccactgctcctgctaagacaaagcgcgtccgtgagtac
aaagttacaatccggtttgcctccaagaccgacgttcatcaccttaaccagtttctcaag
agacgtcagctcgactgtccatatgaaactattcaagctctggacgttgttctgcgggca
actccaaccgaaatgtacaatgtggtggggaggttgttttaccacccttctttggggcga
actggtactctaggcagtggtacagagtactggagaggatattaccaaagtctccgccca
acccaaatggggctgtctctaaatattgatgtgtccgcgaatgcatattatgagccgatt
cctgtgattcatttcattaacaagcattttaattttgatattagaaggcctttgtcggat
caagcccgtgttaagataaggaaatctttgaaaggagtcagggtagaatgtaatcatggt
cagaatattagacggtatagagttgccggcgtcaccaaagaatcactcaaagacttaacg
tttcttgatggcaatggaacaaaaaaatctgttgtcgaatacttccacgagcaatacaat
attatgtttcagtatttgagtcttcctgctctgcaagctggcagtgacactaaaccaatt
tatttgcctatggaggtttgtcatattgtggctgggcagagatacaccaagagattgaat
gaggagcaggtatctgctcttttaaaggcaacctgtcaacgacctcgtgagagggagaac
aatatcaagcaggttgtgaggcagagcaatttcaatgctgaccaaattgtgcgtcaattt
ggaattcaagtgaggggggatcctgcattgattgatgctcgtgttttgacacctccaatg
cttttatatcatcaaagtggcaaagaatctcgtgttgaacccaggatgggtcagtggaat
atgatcgataagaaaatgataaaaggtggtaatgtgcaatattggacttgccttaacttg
tcaatgaatatcagtgatgacatggccggtaaattttgtgatcaactggctgtgatgtgc
acaaccaagggaatgcaattcaatcggacgcctttactgcgtgtaacccatggtcaacct
aatcaggttgagaatgtacttgtgaatttgaataagcagtgtatgtcaaaattagccaac
acaaacgggagactccaattgttgataataattttacctgatgtaaaggggtcttatgga
aaaataaagcgtatttgtgaaactgaactaggaatagtatctcagtgttgtcagccaaga
caaattgtaaagtcgtcgaacaaacaatatcttgaaaatgtggccctcaagataaatgtt
aaggttggtggtagtaacacagtgctgaatgatgcaattgcaaagcaaatccctcacgtg
tctgataaagcaacattgatcttgggtgcggatgtaacacatccacagccaggggaagac
tctagcccttctattgctgcagttgtgggatgcatggattggccttttgttaccaagtac
agaggagttgtttctgcccagccacatcgggaggaaatcattcaagatctttttaaatca
tatcatgatccgaataggggagctgtgtattcaggaataatcagggatttacttatggca
tttcgacgttcaactaacatgaagccagacaggattatattctacagagatggcgtaagc
gagggccaatttagtcaggttttgcttcatgagatggatgctattagaaaggcttgtggt
tcacttcaggcggagtatttccctcctgttacttttgtggttgtccagaaaagacaccac
acacgcttgtttccttttgaacacgaacgtcgtgatcagacagacagaagtggaaatata
atgccagggacggttgttgacacatccatttgccaccctcgggagtttgatttttacctc
aatagtcatgctggaattcaaggaactagtcgtccgactcattatcacgtgttgtatgat
gaaaataatttcaccgcagatgagttgcagaattttacaaatagtttatgttatacctac
gcaagatgcacccgatcagtttcaatagttcctcccgcgtactacgcgcacttggctgca
tttcgtgcacgttactatatagaaggccaattatccgacgccgattcatcaactgaaact
ggaggtagaagagcaaactttcaggttgtattgccatctgtcaaggacaacgtggcagat
gttatgtttttctgctga
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