Cajanus cajan (pigeon pea): 109798455
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Entry
109798455 CDS
T04868
Name
(RefSeq) U-box domain-containing protein 13
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
109798455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccaj04121
]
109798455
Enzymes [BR:
ccaj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109798455
Ubiquitin system [BR:
ccaj04121
]
Ubiquitin ligases (E3)
U-box type E3
109798455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
HEAT_2
Arm_2
Neurochondrin
zf-RING_UBOX
MLKL_N
zf-C3HC4_4
zf-Nse
KAP
zf-C3HC4_2
HEAT_EF3_GNC1
zf-NOSIP
zf-C3HC4
ALIX_LYPXL_bnd
Motif
Other DBs
NCBI-GeneID:
109798455
NCBI-ProteinID:
XP_020214350
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All DBs
Position
4:3003259..3008305
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AA seq
661 aa
AA seq
DB search
MEGDNASKVIELVNEIASISDYRPTVKKHYCNLARRLKLLIPMFEEIRDMKDPIPDDTSK
AVLAFKEALESATELLRFGSEGSKLYLVLERDRIMNKFYEVTARLEQSLGGISYDKLDIS
DEVKEQVELVLAQFRRAKGRVDEPDVRLYEDMLSLYNNSSDAAKADPSVLSRLAEKLQLI
GIADLTQESIALHEMVAASGGDPGARIEKISMLLKKIKDYVQTENLAKDDNLVGKGIFSN
VYGLGTNEKSHQAPVIPDDFRCPISLELMRDPVIVSTGQTYERACIEKWLQAGHGTCPKT
QQTLTSTVLTPNYVLRSLIAQWCEANGVEPPKRPSSSQPSKSSSAYSPAERSKIEGLLQK
LTSGSPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSVPDSRTQEHAVTALLN
LSIYENNKGSIVSSGAVPGIVHVLKKGSMEARENAAATLFSLSVIDENKVTIGSSGAIPP
LVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVIPTLMRLLTEPSGGMVDEALAI
LAILASHPEGKATIRAAEAVPVLVEFIGNGSPRNKENAAAVLVHLCSGDQQYLAQAQELG
VMGPLLEMAQNGTDRGKRKAAQLLERMSRLHEQQQEVPTQTETQAHNEDTRPPLITNPDD
S
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgacaacgcgagcaaggtgattgagttggtgaacgagatagctagcatctcc
gattacaggcctacggtcaagaagcactactgcaacctcgcgcggaggctcaagcttctg
atccccatgttcgaggagattcgcgacatgaaggacccgattcccgacgacacctccaag
gccgtgctcgccttcaaggaagctctcgaatccgccacggaactcctcagattcggaagt
gaaggcagcaagctttacttggtccttgagcgggacagaattatgaataaattctatgag
gtgacagctcggttggaacagtcgttgggtggtatttcctatgataaacttgacatatca
gatgaagttaaagagcaggttgagctggttcttgcccagtttagaagagctaaagggagg
gttgatgaaccagatgtcaggttgtatgaggatatgttgtccctttacaacaacagcagt
gatgcagctaaagcagatccatctgttctaagtcgattagctgaaaaattgcaactgata
ggaatagctgatcttacacaagaatcaattgctttgcatgagatggtggcagcaagtggt
ggggatccaggggcacgcattgagaaaatttcaatgctattgaagaagataaaggattat
gtgcaaacagaaaatctagccaaggatgataatttagtaggaaaaggcattttttcgaat
gtctatggactcgggacaaatgaaaagagtcatcaggctcctgttatccctgatgatttt
cgatgtccaatttccctggaattaatgagggatcctgtcattgtttcaacaggacagact
tacgagcgtgcttgtattgagaagtggttgcaagcagggcacgggacatgccccaaaaca
cagcagactctcactagtactgttctcacacccaactacgttttacgaagcctcatagca
caatggtgtgaagccaatggcgtagagccaccaaaacgacccagcagttcacaacctagt
aaatcatcatcagcctactcacctgcagagcgaagtaagattgaaggtcttctccaaaag
ctcacatctggcagtcctgaagaccagagatcagctgctggtgagatccgtcttcttgca
aagcgcaatgcagataaccgcgtagccattgctgaagctggtgcaatacctctccttgtc
ggcctcctgtccgtgcctgactcccgcactcaagaacatgccgtgacagcacttctgaat
ctttccatatatgaaaataacaaaggaagcatcgtttcttcgggggcagttccaggtata
gttcatgtgctgaagaagggaagcatggaagctcgggaaaatgctgcagcaacactcttc
agcctttcagttatagatgaaaataaggttacaattggatcttcaggagccataccacca
ctagtgacactgctgagtgagggtacccaaaggggtaagaaagatgctgcaacagcactc
ttcaatttgtgcatttaccaaggcaacaagggaaaggcagtgagggccggtgttattccc
acactgatgcgactgctgactgaacctagtgggggaatggtggatgaagcattagctatt
ttggcaatattggctagccatcctgaagggaaggctaccattagagcagcagaggcggtg
ccagttttagtagagtttattgggaatggttccccaagaaacaaagagaatgcagctgct
gttttagttcacctctgttctggagatcaacaatatctagcccaggcccaagagctgggc
gtgatgggtccactattggaaatggctcaaaatggtacagacagaggcaaaagaaaggct
gcccaattgctagaacgtatgagcaggctccatgagcaacagcaggaagttccaacacaa
actgaaactcaagctcacaacgaggatacccgaccaccgttgattactaaccctgatgat
tcctaa
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