Cajanus cajan (pigeon pea): 109798612
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Entry
109798612 CDS
T04868
Name
(RefSeq) THO complex subunit 4A
KO
K12881
THO complex subunit 4
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03013
Nucleocytoplasmic transport
ccaj03015
mRNA surveillance pathway
ccaj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109798612
09122 Translation
03013 Nucleocytoplasmic transport
109798612
03015 mRNA surveillance pathway
109798612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccaj03019
]
109798612
03041 Spliceosome [BR:
ccaj03041
]
109798612
Messenger RNA biogenesis [BR:
ccaj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
109798612
TREX complex
109798612
Spliceosome [BR:
ccaj03041
]
Complex C
Other components
EJC/TREX
109798612
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
109798612
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_3
Turandot
Motif
Other DBs
NCBI-GeneID:
109798612
NCBI-ProteinID:
XP_020214533
LinkDB
All DBs
Position
4:complement(3163335..3166303)
Genome browser
AA seq
250 aa
AA seq
DB search
MSAALDMTLDDIIKNNKKSGSGNSRGRGARTSRSGPGPSRRFSNRAANRAAPYSTAKAPE
ATWQHDMYADQHVAVGGYPAQGGRAPSIETGTKLYISNLDFGVSNDDIKELFSEVGDMKR
HGVHYDRSGRSKGTAEVVFSRRSDAVAAVKRYNNVQLDGKPMKIEIVGTNIATPGVAPAT
NGAIGNFNGVPRSGQGRGGALRRPGGRGQGIRRDRGRGRGRGGGGRGEKVSAEDLDADLE
KYHSEAMQTE
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagctctcgatatgaccctcgacgacataatcaagaacaacaaaaaatctgga
tccggaaactcgcgtggccgcggcgcccgaacctccagatcgggacctggaccttctcgc
cgcttctctaaccgagccgccaaccgcgccgctccttattccaccgctaaggcgccggag
gccacgtggcagcacgatatgtatgcagatcagcacgtggctgtggggggataccctgct
caaggaggccgtgcgccttccattgagactgggaccaaactttacatttcgaacttggat
tttggagtttccaacgatgatatcaaggaattgttttctgaagttggtgacatgaaacgg
cacggggttcattatgacagaagtggcagatcgaagggtacggctgaagtagtattttca
cgacgatctgatgccgtggctgctgtaaaaaggtacaacaatgttcagctagatgggaaa
ccaatgaagatagagattgtgggaaccaacattgctacacctggtgtggctcctgccaca
aatggagctattggaaactttaatggagttcctcgaagtggacaaggaagaggtggtgca
ttaagaaggccaggaggaagaggacaaggcattcgaagggatcgaggacgtggaagaggt
cgtggtggaggaggtcgtggcgaaaaggtatccgcagaagatcttgatgctgatttggag
aagtatcattcagaggcaatgcaaactgaatga
DBGET
integrated database retrieval system