Cajanus cajan (pigeon pea): 109798669
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Entry
109798669 CDS
T04868
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccaj03016
]
109798669
Enzymes [BR:
ccaj01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
109798669
Transfer RNA biogenesis [BR:
ccaj03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
109798669
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TraT
Motif
Other DBs
NCBI-GeneID:
109798669
NCBI-ProteinID:
XP_020214606
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Position
4:complement(9000234..9005411)
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AA seq
612 aa
AA seq
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MEDIEDLLIGSSRSEAPPGFRLPLAAAVGVGVGTKRNQLSSSLPSPAIPGTQTIYIKTFG
CSHNQSDSEYMAGQLSAFGYSLSDNPDLADLWLINTCTVKSPSQSAMDTIISKGKSSNKP
LVVAGCVPQGSRDLKELEGISVVGVQQIDRVVEVVEETLKGHEVRLFTRKKLPALDLPKV
RKNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVDSLVGRVKSVISDGVKEIWLSSED
TGAYGRDIGVNLPTLLKALVAELPADASTMLRIGMTNPPYILEHLKEIAEILRHPCVYSF
LHVPVQSGSDTILSAMNREYTVSEFRTVVDTLTELVPEMEIATDIICGFPGETDEDFVQT
VNLVKEYKFPQVHISQFYPRPGTPAARMKKVPSNVVKRRSRELTNVFESFTPYSGMEGKV
ERIWITDIASDGVHLVGHTKGYIQVLVLAPDNMLGTSAMVKITSVGRWSVFGEVIETVNH
VSDGKALNKLVPNQDMANLCGNPAKNGGFSEVQESCACGNDSCCSQDTLDNSDNSRQNQS
KRNFIGWMLRKRKHLHKKVERELASGYVKKQEGSMREWDFVDKALLGGISISLLTIIALV
VVALTFRVIWSQ
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggaggacattgaggatttgctgattgggagcagccgaagtgaagctccaccaggattt
cgtttgccattagcagctgctgttggcgtcggcgttggaactaagcggaatcaactctct
tcttctttaccttcgcctgcgatccctggcactcagactatctacatcaagacctttggc
tgctcgcataaccagagcgacagcgaatacatggctggtcagctttcggcttttggttac
tctttgagcgataatcccgacctagcagatctctggctcattaacacttgcacagttaaa
tccccgagtcaatctgctatggataccatcatatcaaaaggaaaatcttcaaataaacca
ctagttgttgctggctgtgtccctcaaggaagtcgagatttgaaagagctcgaagggatc
agcgttgttggagttcagcaaattgatcgtgttgttgaagttgtagaggagactttaaaa
ggtcacgaagtgcgcctctttacacgaaagaaattgccagcactggacctccctaaggta
aggaagaacaagtttgttgagattcttcctatcaatgttggttgtttaggtgcttgtact
tattgcaagacaaagcatgctcggggtcacctaggaagttacacagttgatagccttgtt
gggcgtgtaaaatctgtcatatctgatggagttaaagagatatggcttagcagtgaggac
actggagcatatggtcgtgacattggtgtcaatcttccaactttgttgaaggccttagta
gcagaactaccagctgatgcaagcacaatgctgcgtattggaatgaccaatccaccttat
atccttgagcacttgaaagagatagcagagatattacgccatccatgtgtgtactctttt
ctgcatgtaccagttcagtctggaagtgatactattttgagcgcaatgaatcgggaatat
actgtgagtgagttcaggactgttgtagatactttaactgagcttgtaccagagatggag
attgccactgatataatatgtggatttcctggtgaaactgatgaagattttgtgcaaact
gttaaccttgttaaagagtacaagttccctcaagttcatatttcacaattttatcctcga
ccagggacacctgctgcaaggatgaaaaaagttccaagtaatgtggtgaagagaagaagc
cgagaactgacaaatgtctttgaatcctttacaccatactctgggatggagggcaaagtg
gaaagaatatggattactgatattgcatctgatggagttcacttggttggtcatacaaaa
ggatatatacaagttcttgtacttgctccagacaatatgctgggaacttcagctatggtt
aaaataacatctgtgggaaggtggtcagtttttggggaagtaattgagacagtcaaccat
gtaagtgacggtaaagctctgaacaagctggttcctaatcaggatatggctaatctctgc
ggtaatccagccaagaatggtggattctcggaagtgcaagaatcttgtgcttgtggaaat
gacagttgctgtagtcaggatactctcgataacagtgataattcaagacagaaccaaagc
aaaaggaatttcattggatggatgttgaggaagcggaagcatctgcacaaaaaggtagag
agggagcttgcctcgggatatgttaaaaagcaagaaggaagcatgagggagtgggacttc
gttgataaggctcttttgggtggaatatctatcagcctcttgacgattattgctctggta
gtagtagcccttacgtttagagttatttggtcccagtaa
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