Cajanus cajan (pigeon pea): 109798800
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Entry
109798800 CDS
T04868
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF2
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccaj04131
]
109798800
04121 Ubiquitin system [BR:
ccaj04121
]
109798800
Enzymes [BR:
ccaj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109798800
Membrane trafficking [BR:
ccaj04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
109798800
Ubiquitin system [BR:
ccaj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109798800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_11
zf-C3HC4_3
zf-ANAPC11
zf-RING_5
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
109798800
NCBI-ProteinID:
XP_020214787
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All DBs
Position
4:3229150..3231000
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AA seq
355 aa
AA seq
DB search
MNSETQHGTASYWCYSCTRFVHLSAHPTVACPHCQTGFVEEIRPPADASPRHRLSPFPDH
DPLSLRRQGFRRRRRDAANRSPFNPVIVLRGPADDADQDAAAASSFELFYDDGDGSGLRP
LPPTMSEFLLGSGFDRLLEQFAQIEMNGFGRPENPPASKAAIESMPTVEIGEALVQTDAH
CAVCKEAFELHAEARELPCKHIYHSDCILPWLSMRNSCPVCRHELPSDLETRVPSQIDEE
AIGLTIWRLPGGGFAVGRFSGGRRGGDNHFPVVYTEMDGGMNANGAPRRISRSVRSNRVR
ESRGFGRVIRNFFSFFGRIGSRNSSEHGSVSRSRSQVSSLFNRSSRSHSRTWVLD
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgaattcggaaacgcaacacggaacggcgtcgtactggtgctacagctgcacccgcttc
gtccacctctccgcgcaccccaccgtcgcctgcccccactgccagacaggcttcgtcgaa
gagatccgaccacccgccgacgcctccccgcgccaccgcctcagccctttccccgaccac
gacccgctttctctccgccgtcagggcttccgccgccgccgccgagacgccgccaaccgc
tcccccttcaaccctgtcatcgtcctccgcggccccgccgacgacgccgaccaggatgcc
gccgccgcctcctccttcgagctgttttacgacgacggcgacggctccggcctccgcccc
ctcccgcccaccatgtcggagttcctcctcggctccggcttcgaccgcctcctggagcag
ttcgcgcagatcgagatgaacggcttcggccgcccggagaatccgccggcgtcgaaggcg
gcgatcgagtccatgccgacggtcgagatcggagaggcgctggtccaaaccgacgcgcac
tgcgccgtgtgcaaggaggcgtttgagcttcacgcggaggcgcgtgagttaccgtgcaag
cacatctaccactccgattgcattctcccgtggctctccatgcgcaactcgtgccccgtg
tgccgccacgagcttccctccgatttggaaactagggttccgagccagatcgacgaggag
gccatagggttaacgatttggaggctccccggcgggggattcgccgtggggagattctcc
ggcggtcgtaggggcggcgataatcacttcccggtggtgtacacggagatggacggcggg
atgaacgcgaacggtgctccgaggagaatttctcggtcggtgagaagcaatagggttagg
gagagtcgagggtttggtagggttattcgcaatttcttttcattctttggaagaatcggt
tctaggaactcttctgaacatgggtccgtgagtagaagccgtagccaagtgagttcattg
ttcaatagaagctcgcggagccatagcaggacttgggtcttggattga
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