KEGG   Cajanus cajan (pigeon pea): 109798885
Entry
109798885         CDS       T04868                                 
Name
(RefSeq) DNA-directed RNA polymerases II and IV subunit 5A
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
ccaj  Cajanus cajan (pigeon pea)
Pathway
ccaj03020  RNA polymerase
ccaj03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ccaj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    109798885
  09124 Replication and repair
   03420 Nucleotide excision repair
    109798885
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ccaj03021]
    109798885
   03400 DNA repair and recombination proteins [BR:ccaj03400]
    109798885
Transcription machinery [BR:ccaj03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     109798885
  RNA polymerase III system
   RNA polymerase III
     109798885
  RNA polymerase I system
   RNA polymerase I
     109798885
DNA repair and recombination proteins [BR:ccaj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      109798885
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N DUF3557
Other DBs
NCBI-GeneID: 109798885
NCBI-ProteinID: XP_020214903
LinkDB
Position
4:5507617..5509282
AA seq 206 aa
MVLLEEEIGRLYRIRKTVMQMLRDRGYLVGDFEINMSKHDFKSKYGENMKREDLVINKSK
KDNSGDQIYVFFPEEVKVGVKTMKTYTNRMNSENVYRAILVLQTNLTPFARTCISEISSR
FHLEVFQEAELLVNIKEHVLVPEHQVLTDAEKKTLLERYTVKETQLPRIQVTDPVARYYG
LKRGQVVKIIRPSETAGRYVTYRFVV
NT seq 621 nt   +upstreamnt  +downstreamnt
atggtgcttctggaggaagaaatcgggaggctgtaccgcataaggaagacggtgatgcag
atgctgagggacagagggtacctggtgggggacttcgagatcaacatgtccaagcacgac
ttcaagtcaaagtacggcgaaaacatgaagcgcgaggatctcgtcatcaacaagtccaag
aaggacaactccggcgaccagatctacgtcttcttcccggaggaggtcaaggtcggcgtc
aaaaccatgaagacctacaccaaccgcatgaactccgagaacgtctacagagccatcctc
gttcttcagaccaacctcactcccttcgctagaacctgcatcagcgaaatctcttccaga
tttcacttggaggtttttcaggaggcggaactgctggtgaacattaaagagcacgtgctt
gtccccgaacaccaggttctcaccgacgcggagaagaaaaccttgcttgagagatacact
gttaaagaaactcagctacctaggattcaggtgacagatcctgttgcaaggtattatgga
ctgaagcgtggacaagttgtcaagataatccggccaagtgaaactgctggcagatatgtt
acgtaccgatttgttgtataa

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