Cajanus cajan (pigeon pea): 109798889
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Entry
109798889 CDS
T04868
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109798889
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccaj03019
]
109798889
03009 Ribosome biogenesis [BR:
ccaj03009
]
109798889
04131 Membrane trafficking [BR:
ccaj04131
]
109798889
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccaj04147
]
109798889
Messenger RNA biogenesis [BR:
ccaj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
109798889
Ribosome biogenesis [BR:
ccaj03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
109798889
Membrane trafficking [BR:
ccaj04131
]
SNARE
SNARE associated proteins
Others
109798889
Autophagy
Aggrephagy
Other aggrephagy associated proteins
109798889
Exosome [BR:
ccaj04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109798889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_2
AAA_33
AAA_5
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
nSTAND3
AAA_17
AAA_28
Mg_chelatase
AAA_18
Parvo_NS1
ATPase_2
IstB_IS21
ABC_tran
Viral_helicase1
AAA_7
NACHT
NB-ARC
TsaE
AAA_lid_PRS2_C
AAA_24
DUF815
Zeta_toxin
Vps4_C
Molydop_binding
Zot
Motif
Other DBs
NCBI-GeneID:
109798889
NCBI-ProteinID:
XP_020214908
LinkDB
All DBs
Position
4:complement(6657032..6662039)
Genome browser
AA seq
813 aa
AA seq
DB search
MLHCFHLPMSPHPESSDSKSGKKDFSTAILERKKSPNRLIVDEAINDDNSVVSMHPQTME
KLQLFRGDTILVKGKKRKDTVCIALADETCEEPRVRMNKVVRSNLRVRLGDVVSVHTCPD
VKYGKRVHILPIDDTVEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIE
TDPAEYCVVAPDTEIFCEGEPVKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQ
LFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRK
AFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATN
RPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVG
ADLAALCTEAALQCIREKMDVIDLEDETIDAEVLNSMAVSNEHFHTALGISNPSALRETV
VEVPNVSWDDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLA
KAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGS
SVGDAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLP
DEESRYQIFKACMRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIE
RERKRNENPEAMDEDMEEDVAEIKAAHFEESMKFARRSVSDADIRKYQSFAQTLQQSRGF
GSEFRFPESGGRATGSDPFATSAGGADEDDLYS
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgcttcattgctttcatcttccaatgtctccccaccctgaatcatctgactcgaaatcg
gggaagaaggacttctccacggcgattctcgagcggaagaaatctccgaaccggttaatc
gtcgatgaagctatcaacgacgacaactcagtggtttccatgcaccctcaaaccatggaa
aaactccaacttttcagaggcgacactatcctcgtcaaggggaagaaacggaaggacacg
gtttgcattgctcttgcggatgagacttgtgaggagccgagggtgaggatgaacaaggtt
gtgaggtcgaatttgagggttcggcttggagatgttgtgtctgtgcatacttgccctgat
gtcaagtatgggaagcgtgttcatattcttcccattgatgataccgttgaaggtgtcact
ggcaatctctttgatgcttacttgaaaccttacttcttggaggcttatcgtcctgttaga
aagggagatctatttcttgtccgaggagggatgagaagtgttgagtttaaggttattgaa
accgatcctgcagagtattgtgtggttgctccagacactgaaatattctgtgagggggag
cctgtgaaaagagaggatgaagaaaggctggatgaagttgggtatgatgatgtcggtggt
gtcaggaagcagatggcacagattcgagagctggtagagcttccactgagacatccacaa
ctttttaaatcaattggtgtgaaaccacccaaaggaattttgctttatggacccccaggc
tctggtaagacattaatagccagagctgtcgctaatgaaactggagctttcttcttttgt
attaatggcccagagattatgtccaaactggctggagagagtgaaagtaatctcaggaaa
gcatttgaagaagctgaaaagaatgctccatccatcatttttattgatgagattgattct
attgctcccaagcgggagaagacacatggtgaagttgaaaggaggattgtttcacaactt
ttgactcttatggatggattgaaatcccgtgctcatgttattgttatgggagctacaaat
cggccaaatagtattgaccctgcactgagaaggtttggtcgatttgatagggaaattgat
attggtgtccctgatgaagttgggagacttgaagtccttcgcatacataccaaaaacatg
aagctttctgatgatgttgatttagagagaattgcaaaagatactcacggatatgttggt
gctgaccttgctgccctttgcactgaagctgctctgcaatgcatcagagagaagatggat
gtcattgatttggaagatgagactattgatgctgaagtactgaattctatggcagtttca
aatgagcatttccatactgctctagggataagcaatccttctgccttacgagaaactgtt
gttgaggtgcctaatgtcagctgggatgatattggaggccttgaaaatgtcaagcgtgag
ctgcaagagactgttcaatatcctgtggagcacccagaaaaatttgagaaatttggtatg
tcaccatccaaaggagttctcttctatggtcctccaggatgtgggaaaactttgttggcc
aaagcaattgctaatgaatgtcaagctaacttcatcagtgtgaaaggtccagaattgctc
actatgtggtttggtgaaagtgaagccaatgttcgagaaatttttgacaaggccagacaa
tcagctccatgtgtcctcttctttgatgagcttgactccattgctactcagagaggaagt
agtgttggggatgctggtggtgctgctgatagagttctaaatcaacttcttactgaaatg
gatggtatgtctgcgaaaaagactgtgttcataattggagcaaccaacagacctgacatc
attgactcagcacttcttcggcctggtcgtcttgatcaattgatttatattcctcttcct
gatgaggagtcccgttatcagatcttcaaggcctgcatgaggaagtcgcctgtctcaaaa
gatgttgatttgagagcactagccaagtatactcaaggctttagtggtgctgatataaca
gagatatgccagcgagcctgcaaatatgctattagagaaaacatagaaaaggacatagag
cgtgagaggaagagaaacgaaaatcctgaggccatggatgaagacatggaggaagatgtt
gcagagatcaaggctgctcatttcgaagagtcaatgaagtttgcacgtagaagtgttagc
gatgctgatatacggaaataccagtcatttgctcagaccttacagcaatctcggggtttt
ggaagtgaattcaggtttccagagagtggaggtagggccactggatctgacccctttgca
acttctgctggtggggctgatgaagatgatctatatagttag
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