Cajanus cajan (pigeon pea): 109799185
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Entry
109799185 CDS
T04868
Name
(RefSeq) WD repeat-containing protein 18
KO
K14829
pre-rRNA-processing protein IPI3
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccaj03009
]
109799185
Ribosome biogenesis [BR:
ccaj03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
109799185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR5
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
NBCH_WD40
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_C
Beta-prop_ACSF4
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_Vps41
Beta-prop_WDR41
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
WD40_Gbeta
Beta-prop_WDR75_1st
Beta-prop_VPS8
PQQ_2
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_NWD2_C
VPS11_N
WDR90_beta-prop_4th
PEP5_VPS11_N
Beta-prop_HPS5
Beta-prop_NOL10_N
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
109799185
NCBI-ProteinID:
XP_020215314
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Position
4:11320630..11322421
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AA seq
422 aa
AA seq
DB search
MSSSSLELILTSSPDGPIITYEAVTGTTVAKFSGSRIPCRGLATVNRGLIAASHVSLDTG
AGWINVYNWYGSTAFHNFPVPEPVAPLIAYPDGEFLFAGGISGSVFCLSVSSGEVIRSYA
AHSKAVSSLHLSDDRSLVISGSEDGTIVVVPTFKVVVEAFTEEDLIFHKWKAHSDSVTAF
NSGMGTLVSCSMDCTCKFWSQGSNGDLIRTVAFPCAIFGVALDSLGLGFHAAGADGLVYE
GVVKDESMESLGGGYEVNAWSKRHGGSIVSLALLNEGKNLVSASEDGNVWVWDVEKGEVT
MVLGNEMVSISDMIVAKGSGDFGVRKGNNIEVGDGSSGFFTSSGLCHEEMIKTMKQITEI
EEDWDVLVQNKKRAIEMLESAIETYERLLKLILKEATKAIEVGEEEEEEEEQVKDDGKKE
DN
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttcctcccttgaactcatcctcaccagctcccctgacggccccatcataact
tatgaggccgtcactggtaccaccgtggccaaattctctggtagtcgaataccgtgtaga
ggtttggccacggtgaaccggggactgatcgcggcctcacatgtgtcattggacacgggt
gcaggctggatcaatgtttacaattggtatggttctactgcattccacaactttcctgtg
cctgaacctgttgctccactcattgcttaccctgatggagaatttctctttgctggtggc
atatcagggagtgttttttgtctctcggtttcttctggggaagtgatcagatcatatgca
gcacactcaaaagcagtttccagtcttcatttgagtgatgatcggtcacttgttatttca
ggtagtgaagatggcacaattgttgttgtcccaacctttaaggttgttgttgaggccttc
actgaggaagacttgatcttccacaagtggaaggcccattctgattcagtcactgctttc
aactctgggatgggtactttggtttcttgctcaatggattgcacatgtaagttttggagt
cagggaagtaatggggacctcataaggactgtggcatttccatgtgctatttttggggtt
gcattggattcattagggttagggtttcatgctgctggggcagatgggttggtttatgag
ggggtagtgaaggatgagagcatggaatcactaggtggaggctatgaggtgaatgcttgg
tctaagagacatggtggatcaattgtgtcattggctttgttaaatgaagggaagaatttg
gtgtctgcttcagaagatgggaatgtgtgggtgtgggatgttgagaaaggtgaagtgaca
atggttttggggaatgaaatggtgagcattagtgacatgattgtggccaagggtagtggt
gactttggagttagaaagggaaataatattgaagttggggatggaagtagtgggttcttc
acttcttctgggttgtgtcatgaagagatgattaagactatgaagcaaatcactgagatt
gaggaggattgggatgtgttggtacaaaacaagaaaagggcaattgaaatgttggaatct
gcaattgaaacttatgagaggcttttgaagcttattcttaaggaagctaccaaagccatt
gaagtgggggaagaggaagaagaggaagaggaacaagtgaaagatgatgggaagaaggaa
gataattaa
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