Cajanus cajan (pigeon pea): 109799517
Help
Entry
109799517 CDS
T04868
Name
(RefSeq) chromatin assembly factor 1 subunit FAS2 isoform X1
KO
K10751
chromatin assembly factor 1 subunit B
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccaj03036
]
109799517
Chromosome and associated proteins [BR:
ccaj03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
109799517
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
EIF3I
ANAPC4_WD40
Beta-prop_WDR3_2nd
WD40_Gbeta
WDR55
Beta-prop_Aladin
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_WDR75_1st
Beta-prop_DCAF12
B-prop_COPA_B_2nd
Tricorn_2nd
Beta-prop_EIPR1
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_WDR41
NBCH_WD40
DUF4437
BNR
Motif
Other DBs
NCBI-GeneID:
109799517
NCBI-ProteinID:
XP_020215680
LinkDB
All DBs
Position
5:complement(4819582..4824454)
Genome browser
AA seq
608 aa
AA seq
DB search
MKGGTVQISWHESKPVLTLDFHPLSSTLATAGADFDIKFWSIKPAGAQKKLPVVSYLSNL
SYHSSAVNVIRFSSSGELLASGADGGDLIIWKLHSTDAGQTWKALKTLRSHHKDILDLQW
STDAAYIISGSVDNCCIIWDVNKGTNLQTLDAHAHYVQGVAWDPLGKYVTSLSSDRTCRI
YINKPLKSKGVEKINYVCRQVISKADQPLLKNSKETKFHLFHDETLPSFFRRLAWSPDGS
FLLVPAGSYKINTASESVNAAYIFSRKDLSRPAIQLPCASKAVVAVRFCPIFFKLRGMNS
AGLFKLPYRIIFAVATLNSLYIYDTESTSPIAILAGLHYAAITDITWSSDAHYLALSSQD
GFCSLVEFENDELGSPYSLSGKQPYLFCCHIVTTSRFFTLLPFFFLEGNVSNSDSKGTVQ
TVDNTVTVSTRNVSAVLAESKKMDSEEKADDMVIEASGNIGAVRTESGTTVTQENETTGI
VEAVRENSRENKSEEKTDDMVIETTGSIGAAELDCRKAEPEGKGEKEPRNLGTVNFGVQY
KAEKQPANPDLDVKQTEAKEKTEKLQSSLDSIKSGPEEKAGQQLSSSKSTPTSNKPARKR
ITPIAIDP
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgaagggtggtacggttcagattagctggcacgagagcaaacccgtcctaaccctcgat
tttcaccctctctcctccactctcgccaccgccggcgccgattttgacatcaagttttgg
tcaataaaacccgcgggagcacagaagaagcttcccgtagtttcctatcttagtaacctc
tcttaccattcttctgcggtcaatgttattcgcttctcttcttccggggaattgctagcc
tctggtgctgatggaggggaccttataatatggaagctacattctactgatgctggtcag
acatggaaggctctcaagactttaagatcacatcacaaggacattctagacctgcagtgg
tctaccgatgctgcgtatatcatatctggatcagttgataattgttgcattatatgggat
gttaacaaaggaactaaccttcagacattggatgcccatgcacactatgttcagggggtt
gcatgggaccctctgggaaagtatgtcacttctcttagttctgacaggacttgccgaatt
tacatcaacaagcctcttaaatcaaagggcgttgagaaaatcaattatgtttgccggcaa
gtcatttccaaggcagatcagccattattaaagaattctaaggagacaaaatttcatctc
ttccatgatgagacgttgccatctttcttcagaagattagcatggtctcctgatggttca
tttctacttgtgcctgcaggctcttacaaaattaatactgcatctgaatctgtgaatgca
gcttacatattttctagaaaagatctttctaggcctgctatacagcttccctgtgcaagc
aaagctgttgtagctgtccggttctgccccatattttttaaacttcggggaatgaactca
gctgggttatttaagctcccatatcgcatcatatttgctgtggccactttgaattcattg
tacatttatgatacggagagcacctctccaattgctatattagctggtcttcactatgct
gcaataacagatattacctggtcatctgatgctcattatttggcattgtcgtcacaagat
ggcttctgctctttagtggaattcgaaaatgatgagctcggatcaccttactctttatca
ggtaagcagccttaccttttctgctgtcatattgtcaccacgtcgaggttttttacttta
ttaccttttttttttctagaaggaaatgtatcaaacagtgatagtaaaggcactgtacag
acagtcgataacactgtcactgtatcaactaggaatgttagtgcagttctagcagagagc
aaaaaaatggattcagaagagaaggctgatgacatggtcattgaagcatctgggaatatt
ggggctgtcagaacagaaagcgggacaactgtaacacaagagaatgagacaaccgggatt
gtggaagcggttagagaaaatagtagggaaaataaatcagaagagaaaactgatgacatg
gttattgaaacaactggaagtattggtgctgctgaattagattgtagaaaagctgaacca
gaaggtaagggagagaaagaaccacggaatttgggtactgtaaattttggagtacaatac
aaggcagagaaacagccagctaatccagatctagatgttaaacaaacggaagcgaaggag
aagacagagaaactgcaatcaagtttagatagtataaaatcagggccagaagaaaaggca
gggcaacaattgtccagttcgaagagtacacccacttcaaataagccagccaggaagcgt
atcactcctattgccattgatccataa
DBGET
integrated database retrieval system
