Cajanus cajan (pigeon pea): 109799614
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Entry
109799614 CDS
T04868
Name
(RefSeq) uncharacterized protein LOC109799614 isoform X3
KO
K19026
spatacsin
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccaj03400
]
109799614
DNA repair and recombination proteins [BR:
ccaj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
109799614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spatacsin_C
Motif
Other DBs
NCBI-GeneID:
109799614
NCBI-ProteinID:
XP_020215794
LinkDB
All DBs
Position
5:1581767..1616980
Genome browser
AA seq
2402 aa
AA seq
DB search
MNRSLEMLVDVDLAEEGILRLLFAAVYLILNKSGNDSETSAASRLLALATCFATKMLHKY
GLLQHKKDTSVAEGFNKTGLLSLPPIEPVKLQTEVDFARKLCEMAHFLEIIRNLQCRHRS
IFQRASKGLVDSGEESSLISTDMLLEESQLSSLPSDLESVDVLNQHELSFPLPGSDKNEN
LALVPVDSKSDLVSDEFGNISPITPLGGILGKKVLPSENPREMMARWKVGNLDLKTVVKD
ALLSGRLPLAVLQLHLHQLNDFVADKETPNTFTEVRDIGRAVAYELFLKGETELAVATLQ
RLGENIESCLKQLLFGTVRRSLRTQIAEEMKRYGYLGPYEWKMLDDMSLIESLYPSSSFW
KTYNHRLKDISISPDSVLPVENRLRLLHNHSLDNHVIECGEIDGIVFDTWINISESSSAL
EVDEDDAHVGYWAAAAVWFDAWDQRTVDRMILNQSFHSDISLLWESQLEYHVCRNHWKEV
SRLLDLIPAYVLSSGSLQLNLDVLQPVSSLGCNMNTKSSNYGSFLCSLEELDSVCMEVPD
VQMYRFSPAVCSGWMRTLMEENLAKRFIFLKEYWEGTLEMIALLARSGFISGRDKICLED
DLTKTSSVRDGALQAFHKIFVHHCAQYNLPNLLDLYLDHHSLALDNDSFYALQETAVDCE
WARWLLLSRVKGCEYEASLANARSIMSRSLVPRSDLSVLELDEIIRTVDDIAEGGGEMAA
LATLMHAAVPIQSCLNSGGVNRHSNSTAQCSLENLRPTFQKFPTLWRMLVGACLGQDTMA
LLVPKAKTALSDYLNWRDDIFFSTGRDTSLLQMLPCWFPKPIRRLIQLYVQGPLGCQSFT
GFPTGETLLHRDMDLFINTDVHAEISAISWEATIQRHIEEELYGPLLEENGFGLEHLLHR
GRALAAFSQILGHRVENLNSEGESSTSARGQTNVQSDVQTLLSPLGQSEETLLSSVLPIA
IMHFENSMLVASCTFLLELCGLSANKMRIDIAVLKRISSFYKSSENNENLRQLSPKGSVF
HAISHEGDITESLARALADEYLRKDSSVIATETEAVSKQPSRALTLVLHHLEKASLPRLD
DGKTYGSWLLNGNGDGNELRSQQKAASQHWTLVTKFCRLHQLPLSTKYLALLARDNDWIE
FLSEAQIGGYSFDTVVQVASKEFSDPRLRLHMLTVLRGMQSKKKASSSLFLDTQEKGSET
TFPDENMCVPVEIFQILAECEKQNCPGEALLRKAKDLSWSILAMVASCFLDVSPLSCLTV
WLEITAARETSSIKVNDIASQIADNVGAAVNATNALPVGDRVLTFHYNRQSPKRRRLITP
VSLDSSASTLSDISSTSISEKIFDSQGKTMEKDGKLEHFGCINVSSDSDEGPASLSKMVA
VLCEQQLFLPLLRAFEMFLPSCPLLPFIRALQAFSQMRLSEASAHLGSFSARIKEEPMYL
HANVGREMQVGASWISSTASTAADAVLSTCPSPYEKRCLLQLLAATDFGDGGYTAAYYRR
VYWKINLAEPLLRKDDELHLGDEISDDASLLSALENNRHWEQARNWAKQLEVNGAPWKSA
THHVTESQAESMVAEWKEFLWDVPEERVALWNHCHTLFIRYSFPSLQAGLFFLKHAEAVE
KDLPARELHELLLLSLQWLSGMISLSNPVCPLQLLREIETKVWLLAVESETQVKNEGDFN
FTFSTRESGIKNGSSIIDRTASIIAKMDNHINTMRSRTVEKYESRENNQIPHKNQVMDAG
FSTTFGGSTKTKRRAKGYIASRRPPLESADKNADTDDGSSTISFKNELQLQEENVKVEMS
FSRWEERAGAAELERAVLSLLEFGQIAASKQLQYKFSPGQIPSEFRLVDAALKLAAMSTP
PSSVSVPMLDEEVRSVMQSYGIVNDELYVDPLQVLESLVTIFTEGSGRGLCKRIIAVIKA
ANTLGLSFSEAFNKQPIELLQLLSLKAQDSFEEANFLVQTHPMPAASIAQILAESFLKGV
LAAHRGGYMDSQKEEGPAPLLWRFSDFLKWAELCPSEPEIGHALMRLVITGQEIPHACEV
ELLILSHHFYKSSSCLDGVDVLVALAATRVDAYVLEGDFPCLARLITGVGNFYALNFILG
ILIENGQLDLLLQKYSAAADTNTGTAEAVRGFRMAVLTSLKHFNSNDLDAFAMVYNHFDM
KHETAALLESRAEQSCEQWFRRYNKDQNEDLLDSMRYFIEAAEVHSSIDAGNKTRKDCAQ
ASLLSLQIRMPDFQWLYRSETNARRALVEQSRFQEALIVAEAYNLNQPSEWALVLWNQML
KPEVMEEFVAEFVAVLPLQPSMLIDLARFYRAEVAARGDQSHFSVWLTGGGLPAEWAKYL
GRSFRCLLKRTRDLRLRMQLATVATGFGDVNDACSEEMDKVPDNAAPLVLRKGHGGAYLP
LM
NT seq
7209 nt
NT seq
+upstream
nt +downstream
nt
atgaacagatcattggaaatgcttgtggatgttgatctagcagaagaggggattttgaga
ttgctctttgctgcagtgtatcttatacttaataaaagtggtaatgatagtgaaacttct
gctgcttcaaggcttcttgcgctggccacttgctttgcaacaaagatgcttcataaatat
gggttgctacaacataaaaaggatacaagcgtagcagagggctttaacaagacaggatta
ctttctcttccaccaattgaaccggttaaactacaaactgaggtggattttgctcggaaa
ctttgtgagatggctcatttcttggagatcatccgaaatctgcaatgtaggcataggtca
atatttcagagggccagtaaaggattggttgacagtggagaagagtcatctttaataagt
acagacatgttgctggaagaatcccaactttcaagtcttccatctgatttagagtcagtg
gatgtgttgaaccaacatgagctttcttttcctctaccaggcagtgacaaaaatgaaaat
cttgcgctggtgcctgttgattccaagtctgatttggtctcagatgaatttggcaacata
tctcctataaccccattaggaggaattttgggaaagaaagttttgccttcagaaaaccca
agagagatgatggcacgctggaaggtgggtaatctggaccttaagactgttgttaaagat
gctttgctctctggtcgtcttcctttggcagttttgcaactgcatcttcatcaattgaat
gattttgttgctgacaaagagactcccaatacttttactgaagttcgtgacattggcaga
gctgttgcttatgaattatttttgaagggtgaaactgaacttgctgttgctacacttcaa
agacttggagagaacattgaatcttgtcttaaacaacttttgtttggcactgtaaggaga
tccctgcgaacccagattgctgaggaaatgaaaagatacggttatcttggaccatatgag
tggaagatgttggatgatatgtcactaattgagagtctctatcctagcagtagcttctgg
aaaacatataaccaccgcctgaaagatatcagcatttcaccagactctgtattaccagtg
gaaaatagattaaggctcttgcataatcattcacttgataatcatgtcattgaatgtggt
gagattgacggaattgtctttgacacatggattaatattagtgaaagttcctctgctctg
gaagttgatgaagatgatgctcatgttggatattgggctgccgccgccgtctggtttgat
gcctgggaccaaagaactgttgatcgtatgatattgaatcaatcttttcattcggacatt
tctttattgtgggagtcacaacttgagtaccatgtttgccgtaaccattggaaggaagtc
tccagactgctggacttgatacctgcatatgtcctatcttctggaagccttcaactcaat
ttggatgttttacagcctgtctcatctttaggatgcaatatgaatacgaagtcttctaat
tatggaagtttcttgtgctctcttgaagaattggattctgtgtgcatggaagttccagat
gtccaaatgtataggttttcacctgctgtatgttcagggtggatgaggacgcttatggag
gaaaatcttgcaaaaagatttatatttttgaaagaatattgggaagggacattggagatg
atagctctcttggctcgttctggtttcatatctggcagagataagatctgcttggaggat
gatcttactaagacttcatctgttagagatggagctttacaagcttttcataaaatattt
gtacatcactgtgcacagtataacctgccaaatcttttggacctttaccttgaccatcat
agtttggccctcgacaatgattcattttatgcattacaggaaactgcagttgattgtgaa
tgggcaagatggctactcttatcaagagttaaggggtgtgaatacgaggcttcacttgcc
aatgctcgatcgataatgtcacgtagtttagttcctagaagtgacctcagtgttctggag
ttagatgaaataattcgaactgttgatgacattgccgaaggagggggagaaatggcagct
ttggctaccctgatgcatgctgctgtcccaattcaaagctgcttaaatagtggtggtgtg
aacaggcatagtaattccactgcccagtgctcattggagaaccttaggccaactttccaa
aagttccccacattgtggcgcatgcttgttggagcatgtcttggacaagatacaatggcc
ttgctggtccctaaagcaaaaactgctttatcagactatcttaattggcgtgatgacatc
ttcttctctactgggcgtgatacttcacttctgcaaatgcttccatgctggtttcctaag
cctatacgaagattgatacagctttatgttcagggtcctcttggatgccaatcatttaca
gggttccctacaggggaaactttgctacacagagacatggatttattcataaatactgat
gtacatgctgagataagtgcaatctcctgggaggcaactatccaaagacacattgaagaa
gaactatatggtcctttacttgaggaaaatggatttgggcttgagcatcttttgcatcgt
gggcgagcattggcagcttttagccaaattcttggccatagagttgaaaatctgaattca
gaaggggaatctagtacttcagcccgtggacaaactaatgttcaatcagatgttcaaaca
cttctttcaccactaggacaaagtgaagagactctactttcatctgttttgccaattgct
attatgcattttgagaattccatgcttgttgcttcatgtacttttcttctggagctttgt
ggtttatctgccaacaagatgcgcattgatattgctgtgctaaaacggatttcttcattc
tacaaatcaagtgaaaacaatgaaaatctcaggcaattatcacctaagggatctgtgttt
catgcaatatcccatgaaggtgatataacagaatctcttgctcgagctttagctgatgaa
tatttgcgcaaggattcttctgtaattgccactgagacagaagctgtaagtaaacaacct
tcacgagctcttacgcttgtcttgcaccatttggaaaaggctagccttccacggctggat
gatggaaaaacttatgggtcttggctattaaatggaaatggtgatggaaatgagttaaga
tctcaacaaaaggctgctagccagcactggactttggtaacaaagttttgtagattgcac
cagcttccgcttagtaccaagtaccttgctttgttagctagagacaatgactggattgaa
tttctgtctgaagctcagattggaggatattcatttgatacagtagtccaagtggcatca
aaggagtttagtgatccacgtctccgacttcatatgttaacagttttgagaggaatgcaa
tcaaagaaaaaggcaagctcttcattgttcttggatacacaggagaaaggcagtgaaaca
acctttccggatgaaaacatgtgtgttccagttgaaatcttccaaatattagcagagtgt
gaaaaacaaaattgtcctggggaggctcttttgaggaaagcaaaagacttatcctggtca
atattggcaatggttgcttcatgtttccttgatgtctctccattgtcatgcctgacagtt
tggttggaaattactgcagcaagggaaacttcatccatcaaggtgaatgatattgcttcc
cagatagcagacaatgttggagcagctgtaaatgctactaatgcccttcctgtaggagac
agagtacttacatttcattacaataggcagagtcctaaacgtcggcgtttaataactcct
gtttcactagactcctctgcttctacattatctgacatctctagcacttctataagtgaa
aaaatatttgattcccaaggtaaaactatggagaaagatggaaaactagaacattttgga
tgcattaatgtttcaagtgattccgatgaggggcctgcttctctttcaaagatggttgca
gtgctttgtgaacaacaattgttcttgcctttgctaagggcgtttgagatgttccttcca
tcatgccccttgctaccattcatccgagctcttcaagccttttcacaaatgcgtctctca
gaagcttctgcacatttgggttccttttctgcacgaattaaggaagaaccaatgtactta
cacgcaaatgtaggaagagagatgcaggttggggcatcatggattagttctactgcttca
acggctgctgatgctgtgctttcaacctgtccatctccatatgaaaaaagatgcttactg
caacttcttgctgctactgactttggtgatggtggatatactgcggcgtactatcgaagg
gtttattggaaaattaatttagcagagcctttacttcgtaaagatgatgagttgcattta
ggtgatgaaatttcagatgatgcttcactcttatctgcactagagaataataggcactgg
gagcaggcaaggaactgggccaagcagttggaggtcaatggtgcaccctggaaatctgct
acacatcatgttactgaatctcaggctgaatctatggtagctgaatggaaggagtttctt
tgggatgtgccagaagaaagggttgctttatggaatcactgccacacactattcatcaga
tattccttcccctctcttcaagctgggttattttttcttaaacatgctgaagctgttgag
aaagatcttcctgcaagggagcttcatgaacttttattgctttcccttcaatggctgagt
gggatgataagtctatccaaccctgtctgtccattgcaacttctgcgtgaaattgaaacc
aaagtatggctcttagccgttgaatctgagactcaggtgaagaacgaaggagatttcaat
tttaccttttctaccagggagagtggtatcaagaatggctccagtattattgaccgaact
gcaagtattatagcaaagatggacaaccatataaatacaatgaggagtagaactgtagaa
aaatacgagtctcgggaaaataatcaaatccctcacaagaatcaagtgatggatgctggt
ttttcaactacttttggtgggagtacaaagaccaaaagaagggccaaaggatacatagca
tcaaggcgcccacctcttgaatcagcagataaaaatgccgatactgatgatggctctagt
actattagtttcaaaaatgagttgcagttgcaagaggaaaatgtaaaagtggaaatgtct
ttttctaggtgggaggaaagggctggagcagcagagctggaaagggctgtactttcttta
ttggaatttgggcaaattgcagcctctaagcaactacagtataaattctctcctggacaa
atcccatctgagtttagacttgttgatgcagccttgaagcttgcagctatgtcaactcct
cctagcagtgtatcagtgccaatgcttgatgaggaagtgcgttcagttatgcagtcatat
ggtatagtgaatgatgagctctatgtggatccactgcaggttttggagagtttggtgacc
atttttactgaaggcagtgggcgtggcctatgtaagagaataatagcagtaataaaagca
gcaaacacgttgggcctctcattttctgaggcgttcaacaagcaaccaattgaactactg
cagctgctttctcttaaggcgcaagattcctttgaagaggccaattttcttgtgcagact
catccaatgccagcagcaagtattgctcaaatacttgctgaatcttttctaaagggtgtg
ttggctgcacatcgtggaggatacatggattcacaaaaggaggaagggcctgctccactg
ctgtggagattttcagacttcttgaagtgggcggagctttgtccctctgaaccagaaatt
ggacatgctttaatgcgtttggtgattactggacaagaaataccacatgcgtgtgaggtt
gagcttctcattctgtcacaccacttctacaaatcatcttcttgccttgacggagttgat
gttcttgtggcccttgctgcaactagggttgatgcttatgtcttggagggtgattttccg
tgtttagctcgcctgataactggagttggaaatttttatgctctcaatttcattcttggc
attcttatagaaaacggccaattggatcttcttcttcagaaatattctgctgctgcagac
acaaacactggcactgctgaggctgttagaggatttcgaatggcagttctgacatccttg
aagcatttcaatagcaatgacctcgatgcatttgcgatggtctacaatcattttgatatg
aaacatgagacggcagctcttttagagtcacgtgcagagcaatcatgtgagcagtggttt
cgtcgctacaacaaggaccagaacgaagacttgttggattccatgcgctacttcattgaa
gctgctgaagttcactcttcaatcgatgcaggcaacaaaacacgtaaggattgtgctcag
gcttcccttctgtcccttcaaatacgaatgccagatttccaatggctttatcgatcagaa
accaatgctaggcgagcattagttgagcagtctcgatttcaagaagctctgattgtagct
gaagcttataacctgaaccagccaagtgaatgggctttagtactctggaaccagatgctt
aaacctgaagtaatggaggagtttgtggctgagtttgtggcagttctacctcttcagcct
tcaatgctgatagatttagctagattctatagagctgaagttgctgccagaggggaccaa
tcccatttctctgtctggctcactgggggaggattgccagctgaatgggctaaatattta
ggaagatcattcaggtgcttactgaagcgaacaagggatttgaggttgcggatgcagttg
gctacagtggcaactggatttggggatgtcaatgatgcatgctcagaagaaatggataag
gtccctgacaacgcagcgccactagtgctgaggaagggtcatggtggagcttaccttcct
ttaatgtga
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integrated database retrieval system
