Cajanus cajan (pigeon pea): 109799983
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Entry
109799983 CDS
T04868
Name
(RefSeq) LOW QUALITY PROTEIN: protein transport protein SEC16A homolog
KO
K20353
COPII coat assembly protein SEC16
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccaj04131
]
109799983
Membrane trafficking [BR:
ccaj04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
109799983
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
FimL_2nd
Motif
Other DBs
NCBI-GeneID:
109799983
NCBI-ProteinID:
XP_020216248
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Position
6:21353067..21360245
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AA seq
1388 aa
AA seq
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MASNPPFHMEDQTDEDFFDKLVEDDLEPVVKSSHEEDEGNDWDKAKVFANLGISDVDAAA
FENSDASESGVEVKGELVAGESDVGVEQEENSLPSSSSVGFDSKVDPGDDGTVVGSEFTS
TSAGITSDKVGSSGVKMVGWNSFHDDLDRGNRFGSYSDFFSELGDQSGDFPGNTHDNLSS
EVKPGNELQNDDLNASGNYVQYQEGQGYDASLESHTNRQGDGLNTSVNNEQNEKGQAYVA
SSEEHANGQDLSSSQYWEDLYPGWKYDYNTGQWYQEDGYGVTATTQQSSEANAAGHWTAH
SDGKTEISYMQQTAQSFAGTLAETGTTENVSSWSQVSQGNNGYPEHMVFDPQYPGWYYDT
IAQEWRSVETYNSTNQSSVHVLENGHASTSTFSSNDNSLYNEYSQADNYGPPGVDNQAVD
GSWGGLYDANHRQGFDIYTTGTATKRRDNITSAGNQQVNHSYGSSISVNKDLQNSSTSFG
SVVCNKVNHDHGLANGTFEPQSFGPSGDIVQQINYSNTKFREQNYFSNDFTANQYSHAPH
VGRSSAGRPSHALVTFGFGGKLIIMKDPSLLSSSYGNQDSVQGSVSVLNLIEVATGSKDS
MSIGNGASDYFHALSQQSFPGPLVGGSVGIKELYKWLDESIVHCVSPDMDYKQGVRLRLL
LSLLKIACQHYGKLRSPFGTDTILKENDTPESAVAKLFASAKMSSTEFPQYGMPSHCLQN
LPSEGQMKAMALEVQNLLVSGKKKEALQCAQEGQLWGPAIVLASQLGDQFYVDTVKQMAL
RQLVAGSPLRTLCLLIAGKPAEVFSIDTSFSGNPGASNMAQQSSQVGSNGMLDDWEENLA
VITANRTKGDELVIMHLGDCLWKERSQITAAHICYLVAEANFELYSNSARLCLLGADHWK
CPRTYASPEAIQRTELYEYSKVVGNSQFTLHPFQPYKLIYAYMLAEVGKVSDSLKYCQAL
LKSLKTGRAPEVETWKQLALSLEERIRTHQQGGYAANLAPAKLVGKLLNFFDSTAHRVVG
GLPPPAPSSSQGTVHGSEQHYQHMAPRVSSSQSTMAKSSLVPSASMEPISEWTTDNNRMP
KPNRSVSEPDIGRTPRQETTSPDSQGKAQASGATSRFSRFGFGSQLLQKTVGLVLKPRSG
RQAKLGEKNKFYYDEKLKTWVEEGAELPVEEAALPPPPTTAAFKNGSTEYNLRSALKTES
SPPIEGSNIRTSSPELSPGMAPKPPTANQFSAWGHLGVRSRYVDTFNQGGGTSANLFQSP
SVASVKPALAANAKFFIPTPAPSSNEQTMEAIAESHQEVSATNEDPSTSATNEWSYQSPK
HVSPTPIQRFPSMDNISKQLATEGSNADCAHSRRASGVGWSGSLNDSFTPPKMGDINGVF
SNCEVEEK
NT seq
4167 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgaatcctccatttcacatggaggatcagacggatgaggatttctttgacaaa
ctggttgaggatgatttagagcctgttgttaagtctagccatgaggaagacgaagggaat
gattgggataaggctaaagtatttgccaatctgggaatcagtgatgttgatgctgctgca
tttgagaattctgatgccagcgagagtggggttgaagtcaaaggggaattagttgctggg
gaatccgatgtgggagttgaacaggaggagaattctttgccctcctctagctcagttggc
tttgatagtaaggtggatcccggtgatgatgggactgttgtgggatcggaattcacgtcc
acttcagctggaatcacgagcgataaagtcggtagttctggggttaagatggtgggttgg
aattcttttcatgatgatttggataggggcaataggtttggatcatattctgactttttc
agtgagttgggagatcagtctggggattttccggggaacacgcatgataatttaagtagt
gaggtgaagcctggtaatgaacttcaaaatgatgacttaaatgcctctggtaattatgtg
caatatcaagagggtcaaggttatgatgcatctttagaaagccacacaaaccggcaaggt
gatggcttaaatacttcagttaataatgaacaaaatgaaaaaggtcaagcttatgttgca
tcttcagaagaacacgcaaatggacaagatctgagtagtagtcagtattgggaggatctt
tatcctggctggaagtatgattacaacactgggcaatggtatcaagaagatggctatggt
gtaacagccactactcagcaaagctctgaagccaatgcagcggggcattggacagcccat
tctgatgggaaaacagagatctcttacatgcagcaaactgcacaatcttttgctggaaca
ttagctgaaactggcacaactgaaaatgtgtctagttggagtcaggtttcacaagggaat
aatgggtatccggagcatatggtttttgatcctcagtatcctggttggtattatgacaca
attgcccaagaatggcgttcagtggaaacttacaattcaaccaaccagtcttctgttcat
gtacttgaaaatgggcatgcttctaccagtactttctcatccaatgataatagtttgtat
aatgagtatagccaagctgataattatggaccaccgggtgttgataatcaggctgtagat
ggcagctggggtggtttgtatgacgctaaccatcggcagggttttgatatctacacaact
ggtactgctactaaaagacgggataatataacttctgctggtaaccaacaagttaatcat
tcttatggttcaagtatttctgtgaacaaagatctacaaaattcttctacttcctttgga
tcagttgtttgcaataaagtaaaccatgatcatggtttggctaatggaacttttgaacca
caaagctttggccctagtggcgacattgttcaacagattaattattcaaacacaaagttc
agagaacaaaattatttttcgaatgattttactgcaaatcagtattcacacgcccctcat
gttgggagatcatcagctggacgtccttctcatgctctggtaacttttggatttgggggg
aaactcatcataatgaaagatcctagtcttttgagctcatcatatggaaaccaggattct
gtacaaggttctgtttctgtgttgaacttgatagaagttgccactggaagtaaggattct
atgagcattggaaatggtgccagtgattatttccatgctctgagccagcaatctttccca
ggtccattggttggtgggagtgttggaattaaggaactgtacaaatggttagatgagagt
attgtacactgtgtatcacctgacatggattataaacaaggtgtaaggttgagactcctt
ctttccttgcttaaaatagcttgtcaacattatggaaagttacgttctccttttggtacg
gacaccatactaaaagaaaatgatactcctgagtcagcagttgcaaaactttttgcatct
gccaaaatgagtagcacagagttccctcaatatgggatgccaagtcattgcttgcaaaat
ttgccttctgaaggacaaatgaaggcaatggcccttgaggttcaaaatcttcttgtttct
gggaaaaagaaggaggctttacaatgtgcacaagaaggacagttgtggggacctgcaatt
gttcttgcttcacaacttggcgatcagttttatgttgatacagtgaagcaaatggcactt
cgccagcttgttgctgggtcacctttgcgcacattgtgtcttttaattgctgggaaacca
gctgaagtattttctattgatacctcatttagtgggaatcctggtgcttctaatatggct
caacagtcttcacaggttggatctaatggtatgcttgatgattgggaggagaatctggct
gtaataactgcaaatagaaccaaaggagatgaacttgtaattatgcacctaggtgattgc
ttgtggaaggaaagaagtcagattactgctgcacatatctgctatttagttgctgaagca
aactttgagttatactcaaatagtgcaagactctgtcttctaggagcagatcactggaaa
tgtcctcgaacttatgctagtccggaggctatccagaggactgagttatatgaatattca
aaggtggttggaaactctcagtttacattgcatccatttcagccttataagcttatatat
gcatatatgctagctgaagtggggaaggtttcagattcattgaagtactgccaagcacta
ttgaaatccttgaaaactggtcgtgctccagaagtagaaacatggaaacaattagcatta
tctcttgaggagaggattagaactcaccaacagggtggatatgctgcaaatttggctcct
gcaaagttagttggcaaattgctcaacttttttgatagcactgcacatcgagttgttggt
ggtttaccaccgcctgctccatcatcatcgcaaggaactgttcatggtagtgaacaacat
taccaacacatggcacccagagtatcatctagccaatcaacaatggccaagtcatcatta
gttccatctgcttcgatggaacccataagtgagtggacaactgacaataatagaatgcct
aagcctaatagaagtgtttctgagccagatattggcagaaccccaagacaggaaacaacg
tcacctgattcacaaggaaaagcacaggcatctggggctacatctcgcttttcccgcttt
gggtttggctcgcaacttttgcaaaagacagtagggcttgtcttgaaacctcgctctggt
cgacaggccaaattgggtgagaaaaacaagttctattatgatgagaagctgaagacatgg
gtggaagaaggtgctgaacttccagttgaagaagctgcattgccaccacctccaacaact
gctgctttcaagaatggttcaactgaatacaacttgagatctgcattgaagactgaaagt
tcacctcctattgagggttctaacataagaacttctagccctgaacttagtccagggatg
gcaccgaagccacccactgcaaatcaattttctgcctggggtcatttgggtgttcggtca
aggtatgttgacaccttcaaccaaggtggtggaacctctgcaaacttgtttcaatccccc
tctgttgcatctgtgaaaccggctcttgctgccaatgcgaagtttttcattcctactcct
gcaccatcatctaatgagcagacaatggaggctatagcagaaagccaccaagaagttagt
gcaacaaatgaagatccttcaacatctgccacaaatgagtggtcataccaatctcccaaa
catgtatccccaacgcctattcaaaggttcccaagtatggataacatttcaaaacagtta
gcaacagaaggaagtaacgctgattgtgctcattcacgccgagcttcaggagtgggatgg
agtgggagtttaaatgattcattcacccctccaaaaatgggtgatattaatggtgtgttt
agtaattgtgaagtggaagagaagtga
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