Cajanus cajan (pigeon pea): 109800252
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Entry
109800252 CDS
T04868
Name
(RefSeq) phytochrome E
KO
K12123
phytochrome E
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
109800252
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GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HATPase_c
HisKA
PAS_9
PAS_4
PAS_3
Motif
Other DBs
NCBI-GeneID:
109800252
NCBI-ProteinID:
XP_020216614
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Position
6:complement(3951235..3958381)
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AA seq
1122 aa
AA seq
DB search
MSFGSRGKVKDTSLSTSAESNMNTKRDKTLAQYSADAEILAEFEQSGVSGKSFDYSRMVL
DPPRLVSEEKMIAYLSKIQRGGLIQPFGCMLAIEEPTFRVIGYSENCFQLLGLERKIDSK
QFMSLIGVDATTLFTPPSGASLAKAVASREISLLNPIWLYARATQKPFYAILHRIDVGIV
IDLESARSSDPALSLAGAVQSQKLAVRAISRLQSLPGEDIGLLCDTVVEEVQKLTGYDRV
MVYKFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQASRFLFKQNRVRMICDCHAKPVK
VIQSEELRQPLCLVNSTLRLPHGCHAQYMANMGSIASLVMAIIVNGNDTTRLWGLLVCHH
TSPRYVSFPVRYACEFLMQAFGLQLYMEIQLASQMAEKRILKTQTLLCDMLLRDAPFGIV
NQSPSIMDLVKCDGAALYYDGNCCLLGTTPTETQVKDIAEWLLSNHGDSTGLTTDSLADA
GYPGAASLGDAVCGMATARIDSKHFLFWFRSHTAKEMKWGGAKHHPEDKDDGGKMNPRSS
FKAFLEVVKSKSLPWEISEINAIHSLQLIIRDSFQDTQNTGPKTLNYVQKSDTATGGVDE
LSSVALEMVRLIETATVPIFGVDSGGIINGWNSKIAELTGLQAIETMGKLPVNEIIHPDS
CDTFKNTLSRALQGQEDKNVELKIKQFGLHQQKEVVYLMVNACTSRDYTDAIVGVCFVGQ
DITYEKVVQDKFIKLEGDYKAIIQSLSPLIPPIFSSDENACCSEWNAAMERLTGWKRDEV
VGKLLPGEIFGSFCRLKGQDTLTNFMILLYRGISGQDSEKLPFGFFDRNGEFIETFITAN
KRVDAGGNMFGCFCFLQIVTPDSNQPSEEEHRPRGRENISESKELAYILQEMKKPLNGIR
FTHKLLENTRVSENQKQFLDTSGACERQIMAIIEGTNLGSINEGTLQLNMEEFVLGNILD
AIVSQIMMLIREKNLQLFHEIPDEIKMLSLYGDQIRLQVVLSDFLLNVVNHTPSPNGWVE
IKISPGLKIIQDGNEFIHLKFRMTHFGQGLPSDVLHDMFEGGNQWTTQEGLGLYMSRKIL
SRMNGHVHYVREQNKCYFLIDLEIRTRKERQRNLHAETSMLS
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgagctttggaagtagagggaaggtgaaagacacaagcttgagcacatcagctgaaagc
aacatgaacacaaagagggacaaaacactggctcagtacagtgcagatgctgagattctg
gctgagtttgagcagtctggtgtgtctggcaaatcatttgactactcaaggatggttctt
gaccctcccaggttagtgtctgaggagaaaatgattgcttatttgtccaaaatccaaagg
ggtggccttatccaaccctttggttgcatgcttgcaattgaggaacctacttttagggtc
attgggtacagtgagaattgctttcagttgttgggtttggagaggaaaattgactctaag
cagttcatgagtctgattggggttgatgccacaacccttttcactcccccttctggcgct
tcccttgcaaaagctgtggcttcaagggaaatttcccttttgaacccaatttggctctat
gcaagggcaacccagaagccattttatgccatacttcataggattgatgttgggattgtg
attgatttggagtctgcgaggtcgagtgatccggcattgtcacttgctggggcagttcag
tcgcagaagctggctgttagggcaatttcaaggctgcaatctcttcctggggaagatatt
ggtctattgtgtgacactgttgttgaggaagtgcagaagctcaccggatatgacagggtt
atggtttataagtttcatgaggatgatcatggtgaggttgtatctgagattaggaggtca
gatttggagccttacttgggtttgcattatcctgccacggatatccctcaagcctctcgc
ttcttgttcaagcaaaaccgagttaggatgatttgtgattgccatgcaaagccagttaag
gtcattcagagtgaagaattaaggcaacctctttgcttggtgaactcaacccttaggtta
ccacatggttgtcacgcacagtacatggctaacatgggctcaattgcctctctggtcatg
gcaattatagttaatggaaatgatacaacaaggctttggggtttgcttgtttgtcatcac
acttcgccacgctacgtgtctttcccggttcgctatgcttgtgagttcctaatgcaggct
tttggactgcagctttacatggagattcaattggcatctcagatggcagagaagagaatt
cttaaaacacaaaccttactgtgtgacatgctccttcgtgatgcaccgtttggcattgtg
aatcaatcaccaagtataatggatctggtaaagtgtgatggggctgccttgtattatgat
ggaaactgttgcttgttaggcacaaccccaactgaaacacaggtgaaagacattgcagaa
tggctacttagtaatcatggagactcaacaggtttgacaacagatagtttggctgatgct
ggttatccaggcgctgcttcgcttggtgatgcagtttgtggcatggctacagcaagaatt
gattcaaaacatttcttgttctggttcaggtctcacactgcaaaggaaatgaaatgggga
ggagccaagcaccatcctgaggataaggatgatggaggaaaaatgaacccaaggtcatca
tttaaagcttttcttgaagtagtcaaaagcaaaagtttgccttgggaaatttcagaaatc
aatgctattcattcattacaactaataataagagattccttccaagacacacagaacact
ggtccaaagactttaaattatgtacagaaaagtgacactgcaactggaggcgttgatgaa
ctcagttcagtggcacttgaaatggtgagactaattgagacagcaactgtcccaattttt
ggggttgattcaggtggcataatcaatggatggaattcaaaaattgctgaattgacaggt
ctacaggccattgaaactatggggaaattgccggtaaatgaaattatacacccagactcg
tgtgacacttttaaaaatactctaagcagagccttgcaaggccaggaggacaaaaatgtg
gagttgaaaataaaacaatttgggcttcatcaacaaaaggaagttgtatatctcatggtc
aatgcttgtactagtagggactacacagatgctattgttggggtatgctttgtaggccaa
gacatcacttatgagaaagtggttcaagataaattcatcaagttggaaggtgattacaaa
gctataatacagagtctcagtccactgattccacccatattttcttctgatgagaatgca
tgctgctctgaatggaatgcagccatggaaaggctaactggttggaaaagagatgaagtc
gttggaaaattgcttcctggtgaaatttttggaagcttttgtcgactaaaaggtcaagat
acactgactaattttatgattttactatatcgtggaataagcggtcaagattctgagaag
ttaccgtttggattttttgatagaaatggagaatttatagagacttttataacagcaaac
aagagagttgatgctggtgggaatatgtttggttgtttctgcttcttgcagattgtaaca
ccagactcgaatcagccctctgaagaagaacacaggcctagaggcagggaaaacatttct
gaatctaaggagctggcctatatactgcaagagatgaagaaacctttaaatggtataaga
ttcacacacaaacttttagaaaataccagagtctcagaaaatcaaaaacaatttcttgac
actagtggtgcatgtgaaaggcaaatcatggcaattattgagggtacaaatttaggaagt
attaatgaaggcacattgcagctaaacatggaagaatttgttcttggaaatattttagat
gccattgtcagccaaatcatgatgttgataagagaaaagaacttgcaactgtttcatgaa
attcctgatgaaataaagatgctttctctatatggcgaccaaattaggcttcaggtggtc
ttgtctgactttttgcttaatgtagtcaatcatacaccatctccaaatggctgggtagaa
atcaagatttcacctggtttaaagataatacaggatggtaatgagtttatccatctgaag
ttcagaatgactcatttcggtcaaggtcttccttcggatgttcttcatgatatgttcgaa
ggagggaatcaatggactacacaggaaggtctaggactatatatgtccaggaaaatcctc
agtaggatgaatggtcatgttcactacgtcagagaacaaaataagtgctattttctcatt
gatcttgaaattagaacaagaaaagaaaggcaaaggaatctccatgcagagacaagcatg
ttaagttag
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