Cajanus cajan (pigeon pea): 109800275
Help
Entry
109800275 CDS
T04868
Name
(RefSeq) protein LHY
KO
K12133
MYB-related transcription factor LHY
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
109800275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccaj03000
]
109800275
Transcription factors [BR:
ccaj03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
109800275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_7
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
109800275
NCBI-ProteinID:
XP_020216646
LinkDB
All DBs
Position
1:12836..38617
Genome browser
AA seq
750 aa
AA seq
DB search
MDAYSSGEEVVVKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ
IRSHAQKFFTKLEKEALVKGVPIGQALDIHIPPPRPKRKPSNPYPRKTKIGTATLHSGAK
DGKLNLVESSHVNQELDLEKEPFPEKHDSDEGPTTVKENKDENRSNAFTLLQEVPCSSVS
SANKSSITMSMPLGNSCALKEITPSVTEVIARDGKTESFVTIELENGKLEINDGKQTNVT
SKGPTLENSDAVRMKLIQSEKTDGLDCALTIEGMQGNQNYPRHVTVHVVDGNLGTSAQSQ
NPSKDMLFRDSMFQPIGGVNGQPNLFTNSGASNTSESQNNTARSSVHQSFLPCAPFTQHS
QDDYQSFLHMSSTFSNLIVSTLMQNPAAHAAASLAATFWPYANPETPADSPSCSQGGFTS
RQIGSPPSVAAIAAATVAAATAWWAAHGLLPLCTPLHTAFACPPASVTAAPSMNNGEAPS
LNTKQEKATLQNHPLQDQMLDPECSEAQHSPSKSPAVISSDSESADAKLNTSPKATDHET
NKTVSEHLDSSKTKGKKQVDRSSCGSNTASSSDVETDALEKDEKGKEEPEANDANHLAID
SCNRRRSISNLTDSWKEVSEEGRLAFQALFSREVLPQSFSPPHALKNKDHQMDIKDNQQN
IDEKAEDLDSKKCSYNYEEMQKDSPFIENNEGLLLTIGLGQGKLKTRRTGFKPYKRCSME
AKENRVGAASNQGEEKGCKRIRLEGGETST
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggacgcatactcctctggcgaagaagtggttgttaagacgagaaagccatatacaatc
acaaagcaaagagaacgatggacagaggaggagcataataggtttctagaagctttgaaa
ctgtacggacgagcatggcagcgcatagaagagcatataggaacaaagactgccgttcaa
atcaggagccatgcacagaagttcttcacaaagttggagaaagaggcccttgtaaagggt
gttccaattggacaagctcttgatatacacattccccctccacggcccaaaagaaaacca
agcaatccttatcctcggaagaccaagattggtaccgcaacattacatagtggagcaaag
gatggaaaactcaatttagttgaatcttcacatgtcaaccaagaactggacttggaaaaa
gaaccatttccggagaaacatgattcagacgaagggccaacaactgtaaaagaaaataag
gatgaaaaccgctcaaatgcatttactcttctccaggaggtaccctgttcctctgtatct
tcagcaaacaagagttcaataacaatgtcaatgccactgggaaattcatgcgccttaaag
gagattacaccttcagttacagaggtaatagcacgagatggaaaaactgaatcttttgtc
actattgaacttgaaaatgggaagttggagatcaatgatggaaaacaaactaatgtcact
agtaaaggccccacgttagagaattctgatgctgtacgaatgaaattgattcaaagtgag
aaaacagatggtcttgattgtgcattaacgatagagggaatgcaaggcaatcagaattac
cctagacatgttactgtgcacgttgttgacgggaaccttggaacaagtgctcaaagtcaa
aatccatcaaaagatatgttgtttcgagactccatgtttcagccaataggaggggttaat
ggccaaccgaatcttttcaccaattcaggtgcatcgaacacaagtgaaagtcaaaataac
acagcacgatcttctgttcatcaatcatttcttccttgtgctcccttcacacaacacagc
caagacgattaccaatcatttcttcacatgtcttccacattttcaaatcttattgtctct
actctgatgcaaaacccagcagctcatgctgcagcaagtttagccgctacattttggccc
tatgcaaatccagaaactccagcagattctcctagctgctcccaaggaggttttacttct
agacaaattggctctcctccaagcgtagcagctattgcagctgctactgtagctgctgca
actgcctggtgggcagctcatggattgcttcccttgtgcactcctcttcatactgctttt
gcctgtcctcctgcatcagtgactgcagctccatcaatgaataacggtgaagcaccgtcc
ctgaatacaaaacaagaaaaggctactctacaaaatcatcctctgcaagatcagatgctg
gatccagaatgctcagaagctcaacattcaccttcaaagtcaccagctgtcatttcatca
gattctgagagtgcagatgccaagttaaatacttcaccaaaggctactgatcatgagacg
aacaaaacagtttccgagcaccttgattcaagcaaaacgaagggcaaaaaacaggttgac
cgttcctcatgtggttccaacacagcctctagcagcgatgtggaaactgatgcactagaa
aaggatgagaaagggaaggaagagcccgaagcaaatgatgctaaccatttagctattgat
tcttgtaatcgtcgtagaagcattagcaaccttactgattcttggaaagaggtctctgaa
gaggggagattggcctttcaggctctattctccagagaggtgttgcctcaaagcttttca
cctcctcatgctttgaagaataaggatcatcaaatggacatcaaggataaccagcaaaac
atagatgaaaaggctgaagaccttgacagcaaaaaatgcagttataattacgaagaaatg
cagaaagattcgccatttatagaaaataacgagggactgctgctgaccatagggcttgga
caaggaaagcttaagactcgtcgaacaggctttaaaccctacaaaagatgttctatggag
gccaaggaaaatagggttggagcggccagcaatcaaggtgaagagaaaggttgtaagaga
atacgtttggaagggggggagacttcgacttga
DBGET
integrated database retrieval system
