Cajanus cajan (pigeon pea): 109800432
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Entry
109800432 CDS
T04868
Name
(RefSeq) probable rhamnogalacturonate lyase C isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
109800432
Enzymes [BR:
ccaj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
109800432
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
VasL
Ebola_NP
Motif
Other DBs
NCBI-GeneID:
109800432
NCBI-ProteinID:
XP_029127787
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Position
6:complement(13349054..13359390)
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AA seq
673 aa
AA seq
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MKVASQKQVSFKWFGMAVQFSIIILSACSERSFRRVSTPPLPPPVKLNTQDSHEVVITND
YVSLNVAKPEGYITGIFTGINNVLDTGIHTDHRGYFDVVWDDPGKSGKFDRISGTNFSVI
VANESIVEVSFLRTWQTSMKGSCVPINIDQRYIMRRGESGFYSYVIFDRPQGLPAVEVYQ
IRNVYKLAVNRFSYMAISDTRQRNMPSLTDRKQGRTLAYPEAVLLTNPNDSKFKGEVDDK
YQYSSEIKDDRVHGWITQDHFAPEGFWIITPSNEFRSAGPVKQDLTCHVGPTVLSMYTST
HYGGKDVTMTFKEGETHKKVFGPIFVYLNSASLKEQFRTLWPDAVRQSSNEVEKWPYDFV
GSKDFIPPNQRGTVAGLLQIQDGGGKAQPASNASVGLALPGKAGSWQKECKGYQFWNQTD
KNGNFLIKNIVPGDYNLYAWVPGFIGDYMYTTKITIKPGGNINLGSLVYNPPRNGPTLWE
IGIPDRSAAEFYIPDPNPELINRLYSNNGTDKFRQYGLWERYTELYPKQDLVYTVGVSNY
HKDWFYAQVTRNVNKTYVPTTWQIKFPLQNIIMGGNYTLQVALASATYSRVEVRFNDPNV
KLPHFSTGPIGDDNAIARHGIHGLYRLYTIVVGSNHLVKGNNTIYLTRSKATSFFEGVMY
DYIRLESPPTKAT
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtggcaagtcagaaacaagtttcattcaaatggtttggaatggctgtgcagttc
agcataatcatactcagtgcctgttctgagaggtcatttagaagagtttcgacgcctcct
cttcctcctccagtgaagctgaatacccaagattctcacgaggtggtaattactaacgac
tatgtttccctcaatgtggcaaagcccgagggctatatcactggaatatttactggaatt
aacaatgtacttgacactggaattcatacagaccatagagggtattttgacgttgtttgg
gacgatccaggaaaatctggaaagttcgacagaattagtgggactaatttctcggtcata
gtagcaaacgagagcatagtggaggtttcatttttaagaacatggcaaacttcaatgaaa
ggctcatgtgtccccataaacatagaccaaaggtatataatgcgaagaggtgaatctggg
ttttattcatatgtaatatttgacagaccacaaggattacctgcagtggaggtttatcaa
attagaaatgtttacaaactcgcggttaacaggttttcctatatggctatatccgatact
aggcaaaggaacatgccatctcttacagatagaaaacagggtagaaccttggcgtaccct
gaagctgttctcttaaccaatccaaacgactcaaaatttaagggagaggtggatgacaaa
taccaatactctagtgagatcaaagatgaccgtgttcatggctggattacccaagatcat
tttgcacctgagggtttctggatcataacgcccagtaacgagttccgcagtgctgggcct
gttaaacaagacctcacctgtcatgttggcccaactgttctttccatgtacacgagcact
cactatggtggcaaggatgtaaccatgacatttaaagaaggggagactcataaaaaggtt
tttggcccaatttttgtttaccttaactctgcttcactcaaagaacagtttcggactcta
tggccagatgctgtgagacagtcatccaatgaagtcgaaaaatggccttacgatttcgtt
ggatcaaaagatttcattccacccaatcaacggggaacagtggcaggactgttacaaatt
caagacggaggagggaaagctcaacctgctagcaatgcttctgttggtctagctttgcct
ggtaaagcaggatcatggcagaaagagtgcaagggttatcaattctggaatcaaactgac
aaaaacggaaacttcttaattaaaaatatagtacctggggattacaacttgtatgcatgg
gttcctggttttattggagattacatgtatacaaccaaaattaccatcaagccaggaggc
aacatcaacttgggctcacttgtatataatccaccaagaaatggtcctactctatgggaa
attgggatcccagatcgctcagctgcagaattctatataccagaccctaatcccgagctc
attaacagattatattctaacaatggcacagacaagtttaggcaatacggcttgtgggag
cgttacactgagttatatccaaaacaagatctcgtttacacggttggtgtttctaattat
cacaaggattggttttacgctcaagttaccaggaatgtaaataagacatatgtgccaacc
acatggcagattaaattcccacttcaaaatatcataatgggaggaaactacacactacaa
gtagccctagcatccgccacttattctagagtggaggttaggtttaatgacccgaatgta
aagcttcctcacttctcaacagggcctattggcgatgacaatgccatagcaagacacgga
atccatggattgtataggctatatacaatagttgtaggtagcaatcatttggttaaagga
aacaacaccatttatttgacacggtcaaaagccacaagtttcttcgaaggagttatgtat
gattatatccgtttagaaagtcctccaactaaagctacttga
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