Cajanus cajan (pigeon pea): 109800492
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Entry
109800492 CDS
T04868
Name
(RefSeq) plant-specific TFIIB-related protein 1
KO
K03124
transcription initiation factor TFIIB
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109800492
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccaj03021
]
109800492
Transcription machinery [BR:
ccaj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
109800492
Prokaryotic type
Archaeal type
TFB
109800492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Cyclin_C
HTH_Mga
Motif
Other DBs
NCBI-GeneID:
109800492
NCBI-ProteinID:
XP_020216860
LinkDB
All DBs
Position
6:17255720..17258540
Genome browser
AA seq
470 aa
AA seq
DB search
WVKELQSHPHHVFHLRAQDNPLCLVTSDLPLPTLHQNDEDPFEPTGFITAFSTWALEPSP
LYLQSSLSFSGHLAELERTLESSSSSSSATSSSSSSSTVVVDNLRAYMQIIDVASILGLD
CDISDHAFQLFRDCCSATCLRNRSVEALATAALVQAIREAQEPRTLQEISIAANVPQKEI
GKYIKILGEALQLSQPINSNSISVHMPRFCTLLQLNKSAQELATHIGEVVINKCFCTRRN
PISISAAAIYLACQLEDKRKTQAEICKVTGLTEVTLRKVYKELLENWDDLLPSNYTPAVP
PERAFPTTVIASGRSSTAKVDVVEIISSLDSEKLPEIKPNKPNDVSAMVHHSRGKDEAEG
KSNAPANHSTLNQQSTFWQPQLPSGTHNHQNVLQGMDIDVLQRNHQQPEHMAGETNGAAN
GSSLKSNQLCCPPSSSANSVKRPFSAPPSSGPSNVRLVQSPKTMPGYPEH
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
tgggtgaaagagctgcagtcgcatccgcaccacgtgttccacctgcgcgcccaagacaac
cctctgtgcctggtcacatcggatctccccctccccacactccaccaaaacgacgaggac
cctttcgagcccacgggcttcatcaccgccttctccacctgggccctcgagcccagccca
ctctacctccagtcctccctctccttctccggccacctcgccgagctcgagcgcactctc
gaatcctcctcttcctcttcctccgccacctcctcctcctcttcgtcctccacggtggtt
gttgataatttgagggcctacatgcagattatcgatgtagcgtcgattctagggttggac
tgcgacatttccgaccacgcttttcagttgttcagggattgctgctccgccacgtgtttg
aggaaccgcagtgtggaggcgcttgccactgccgctctcgttcaggccattagagaggct
caagaacccagaacccttcaggaaatttcaattgcagccaatgtgccacaaaaggaaatt
ggtaaatacatcaagatactgggagaggctttgcagctaagtcaaccaattaacagcaat
tccatttcagttcatatgccaagattttgcacactccttcagctcaataaatctgcccag
gaactggctactcacataggagaggttgtgatcaacaaatgcttctgcactcgcaggaat
ccaattagcatctcagctgctgctatatatttggcttgccaacttgaagacaaacgcaaa
acccaggcagaaatttgtaaggtaaccggtcttactgaagtcactctgcgaaaagtctac
aaggaactattggagaattgggatgatttgcttccctctaactacaccccagctgttcct
ccagagagggcatttcccacgactgtaattgcttcaggtcgttcttcaacagccaaggtt
gatgttgtggagattatttcttctttggactcagaaaagttgccagaaattaaacctaac
aaacctaatgatgtctcagccatggttcatcattccagagggaaggatgaggctgaaggc
aaaagcaatgctcccgcaaaccactccacactgaatcaacagtcaactttttggcaaccc
cagcttcccagtgggacacacaatcatcagaatgttttacaaggaatggatattgatgta
ttgcagcgtaaccaccaacagcctgaacacatggcaggggaaacaaatggtgccgccaat
ggtagttctctaaaatcaaaccaactttgctgtcctccttcttccagtgcaaactctgtt
aagaggccgttttcagctcccccttcatctgggccttcaaatgttagattagtacagtca
cccaagacaatgccaggttatccggagcactga
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