Cajanus cajan (pigeon pea): 109800928
Help
Entry
109800928 CDS
T04868
Name
(RefSeq) vacuolar protein sorting-associated protein 35A
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109800928
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccaj04131
]
109800928
Membrane trafficking [BR:
ccaj04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
109800928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
109800928
NCBI-ProteinID:
XP_020217447
LinkDB
All DBs
Position
6:complement(15979328..15990975)
Genome browser
AA seq
794 aa
AA seq
DB search
MMLDGTEDEDKFLAAGIAGLQQNSFYMHRALDSNNLRDALKYSAQMLSELRTSKLSPHKY
YELYMRAFDQLRKLEMFFEEETRRGCSIIDLYELVQHAGNILPRLYLLCTVGSVYIKSKE
APAKDVLKDLVEMCRGIQHPVRGLFLRSYLSQVSRDKLPDIGSEYEGDADTVADAVEFVI
QNFTEMNKLWVRMQHQGPAREKEKREKERSELRDLVGKNLHVLSQIEGVDLDMYKDVVLP
RVLEQVVNCKDELAQFYLMDCIIQVFPDEYHLQTLDVLLGAYPQLQPFVDIKTILSQLME
RLSNYAASSAEVLPEFLQVEAFSKLSNAIGKVIEAQPDMPTVGVVTLYSSLLTFTLHVHP
DRLDYADQVLGACVKKLSGKGKIEDNRATKQIVALLSAPLEKYNDIMIALKLSNYPRIME
YLDIPTTKVMATVIIQSIMKNGTRISTSEKVEALFELLKGLIKDSDGIPNNELDEDDFKE
EQNSVSRLIQMLYNDDPEEMFKIIDTVRKHILAGGPKRLPFTVPPLVFSSLKLVRQLQGQ
EENPFGDDASTTPKKIFQLLNQTIETLSGVLAPELALQLYLQCAEAANDCDLEPVAYEFF
TQAYILYEEEISDSRAQITAIHLIIGTLQRMHVFGVENRDTLTHKATGYSAKLLKKPDQC
RAVYACSHLFWVDDHDNMKDGERVLLCLKRALRIANAAQQMANAARGSTGSVMLFIEILN
KYLYFFEKGNLQITVAAIQGLIELIMNEMQSDSTTPDPAADAFLASTMRYIEFQKQKGGT
VGEKYEAIKVSHAG
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgatgttagacggaaccgaagatgaagacaagtttctggccgccggaatcgctggcctt
cagcagaattccttctacatgcaccgtgcattggactccaacaatctcagggatgctctc
aagtattcggctcagatgctctccgagctcaggacttccaagctttctccgcacaagtac
tacgaactatacatgcgcgccttcgatcagttgaggaagctcgagatgttcttcgaggaa
gagactcgtcgcggttgctccattattgatctttatgaactcgttcaacacgccggcaac
attttgcctcgactgtatctcctctgtacggtaggatcagtatacatcaagtccaaggaa
gctcctgcaaaagatgttcttaaggatcttgtggagatgtgtcgtggcattcagcatcct
gttcgtggactgtttcttagaagttacctttctcaagttagtagggataaattgccagat
attggttcagagtacgaaggggatgcggatactgtagcagatgctgtagagtttgtaatc
caaaatttcactgaaatgaacaaactttgggtgcggatgcaacatcaggggcctgcccgg
gagaaggagaaacgggaaaaggaaaggagcgagttgcgtgatcttgttgggaagaatctt
catgttctcagtcagatagagggtgttgacctggatatgtacaaagatgttgtacttccc
agagtactggagcaggtagtgaattgcaaagatgagttggctcagttctacttgatggat
tgcataatacaagtcttccccgatgagtatcacttgcaaactcttgatgtgctgctgggt
gcttaccctcaacttcagccatttgttgatatcaagacaatactgtcccagttaatggaa
aggctttcaaattatgctgcttcgagtgcagaggtgttgccagagtttttgcaagtggaa
gcattttccaaattaagcaatgccattggcaaggtgatagaggcacagcctgacatgccc
actgttggagttgtaactttatattcatcccttctcacctttactcttcatgtccaccct
gaccgacttgattatgctgatcaagttttgggagcatgtgtgaaaaaactctctggcaaa
gggaaaatcgaggacaacagggcaaccaagcagattgttgctctattaagtgccccacta
gagaaatataacgatattatgattgctttgaagctttcaaattatcctcgcataatggaa
taccttgatattccaactactaaggtcatggcaactgttattattcagagcattatgaaa
aatggaacacgcatttctacttcagaaaaggttgaagcattgtttgaacttttaaagggg
cttatcaaggattctgatggtattccaaataatgagttggatgaagatgatttcaaagag
gagcagaattctgtttcccgtctaatccagatgctttataatgatgatccagaagaaatg
tttaagatcatagatactgtgaggaagcacatactggctggaggaccaaaacgtctccct
ttcactgttccacctcttgttttttcttctttaaagttggtcagacaattgcaaggtcag
gaagaaaatccttttggagatgatgcatcaacaacaccgaagaaaatttttcagcttcta
aatcagaccattgagaccttgtcaggtgtcctggcaccagaattagccctgcagttgtac
ttgcaatgtgctgaggctgcaaatgactgtgatttggaacccgttgcttatgaatttttc
actcaagcttatattctatatgaagaagaaatttctgattccagagcacagatcacagcg
atccatttaataataggaactcttcaaaggatgcatgtctttggtgttgaaaacagggat
actttaactcacaaggccacagggtattcagcaaagcttttaaagaagccagatcaatgc
agagctgtgtacgcatgctcacatttgttttgggttgatgatcatgataacatgaaagat
ggagagagggtcctattgtgtctcaagcgggctttaagaattgcaaatgctgcccaacaa
atggcaaatgcagcacgaggtagcaccggatcagtaatgctcttcattgagatattgaac
aagtatctttacttctttgagaagggaaacctacaaatcaccgttgctgctatccagggc
ttgattgagttaattatgaatgaaatgcagagtgacagcacaactccagatccagctgcc
gatgctttcttagccagtactatgcgatacatagagttccagaaacaaaaaggtggcaca
gttggcgagaagtatgaagccatcaaggtttcacatgctggatga
DBGET
integrated database retrieval system
