Cajanus cajan (pigeon pea): 109800980
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Entry
109800980 CDS
T04868
Name
(RefSeq) Fanconi anemia group J protein homolog isoform X1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03440
Homologous recombination
ccaj03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109800980
03460 Fanconi anemia pathway
109800980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccaj03400
]
109800980
Enzymes [BR:
ccaj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
109800980
DNA repair and recombination proteins [BR:
ccaj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
109800980
FA (Fanconi anemia) pathway
Downstream FA components
109800980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
Pex19
HBB
Yippee-Mis18
Motif
Other DBs
NCBI-GeneID:
109800980
NCBI-ProteinID:
XP_020217514
LinkDB
All DBs
Position
6:1091496..1108068
Genome browser
AA seq
1258 aa
AA seq
DB search
MKTEANAKGKMVSATNPNPKNVYHIGGLQVEFPYQPYGSQFAFMGRVISTLDRAQREGHC
HALLESPTGTGKSLSLLCSSLAWQRQYKDKAKQHKLNLATEATTDPLAHGGGFVPEEVSL
SSASENVDRTQPEVGNKKQKKKEAPTIYYASRTHSQISQVIRELRKTAYRVPMAVLASRK
HYCTNKNIIGKDNINEECKLLLKDQETGCPEFKNAHKVKSHQSLQKGGCNEVHDIEDLVK
VGQVVKGCSYYAARSMSDDAQLVFCPYNYIINPVIRAAMDVDIKGAIVILDEAHNIEDIS
RDAGSVDLEEDVLDKLQMELQQLCSVNAAIYQPLYEMAQGLTSWMEQKKNKLEKRDFQHY
VSCWTGDNALRELEEANISKQCFPILLECATKAIKIATDLETDAQHLSGMSVITLEGFFS
SLTYFFSRNGSHMLDYQLALQRCVRKDSGRAFGNWTHTLSLWCLNPAVVFRDVADLSLSV
ILTSGTLSPMTSFSSELGVHFETSLEAPHVIDVDSQVWPAIISTGPGNYPLNASYKTADG
YAFQDAVGKSLEEIFKIVPGGCLVFFPSYKLMEKLCNRWSETGQWSRLNAEKSLFVEPRA
GSQDDFELTIKGYYDSIHHGKRPALGGKKRIKKSDLNHVHAVDSLQNSMKGGAALLGVCR
GKVSEGIDFSDDNARVVIIVGIPFPNINDIHVALKKKFNDTYKSSKNLLSGNEWYCHQAF
RALNQAAGRCIRHKLDYGAIILLDERFREERNRAFISKWLRRPLRVYDRFDMSLEGLKSF
FEDAKEQYGINTVHATKKLGLNDEDVQNKDRSARFTRKKNQKLNKSDNGDGRETSLIQTN
ISFPTLTPQDLVESKPLAQKNSNTYKCKYHSQCCNQTEPRFTGESSVAIIHEETSIVKET
PCIDVDDDLSSPDYSKNDNFGSTMIEAPAPSADHLSSLSMSLTSGSKNSSRAQSSITITP
KKNVITNDILEKESSLNLSVNSHNPKRRKAMVTPFINLVEEENFTASCASPLTWYRKSSV
DIREISQGSECGFERTLKSNSSSLLTSNIPGSCSPTAPPPDKRLQIFCSHCKGPLGRPEN
HLYLTCLLNSLSKVHLRSLLKQRLKTCTTDSVPVIITDSLFVDQRICNRIPKSAPEQGIW
CPEDGCVFSTIFCPFCSNIDNLLGVQIMATDSSNVQLLDKILFFFDSLEVKSGEESGNIA
SGEGDLLPVNDSGMEKIAVLNSIEKYSYHPQPGNSEISKTTRKSKQKLRGLHRAANQS
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactgaagcgaatgcaaaaggaaaaatggtctctgcgacgaaccctaaccctaaa
aatgtgtaccacatcggaggccttcaagtggaatttccttaccaaccgtacgggtctcag
tttgcattcatgggtagagtaatctcaacgcttgatcgagctcagagagaaggccattgt
cacgcgttgctcgagtctccaaccggtactggcaagtccctttcgcttctctgttcctct
ctcgcttggcagcgccaatataaagataaagctaaacagcacaaactcaacctcgctacg
gaggcaaccaccgatcctcttgctcatggcggcggatttgttccggaggaggtttcgctt
tcttctgcatcagaaaatgtggaccgtacgcagcctgaggtcggcaacaagaagcagaag
aaaaaggaagcgccgactatatattatgcctcgagaacgcactcgcaaatttctcaagtg
attcgtgaattgcggaaaacggcatacagggtgcctatggctgtgttggcatcacggaag
cattattgcacaaataaaaatataattggcaaagataatatcaatgaagaatgtaaacta
ttattgaaagatcaggaaacagggtgtccggaattcaaaaatgcacataaagtcaaaagt
catcaatcccttcagaaaggaggatgcaatgaggtgcatgacatagaagatcttgtaaaa
gttgggcaagtggtaaaaggttgctcttattatgcagctcgttctatgtcagatgatgca
cagttggtattctgtccatataactacatcattaatccagtaatacgggcagcaatggat
gtggatattaaaggagccatagtgattcttgatgaagctcacaatatagaggacatttct
cgtgatgctggcagtgtggatcttgaagaggatgttttggataaactacaaatggagctc
cagcaactttgttctgttaatgctgcaatttaccaaccgctatatgaaatggcacagggc
cttactagttggatggaacaaaagaaaaacaagctagaaaaacgtgattttcagcactat
gtgtcgtgttggactggtgataatgctttaagagagcttgaagaagcaaatatttcaaag
cagtgtttccctatcttgctagaatgtgctaccaaggcaatcaaaattgctactgacttg
gagactgatgcacagcatttaagtggcatgtcagtgataacattggaaggctttttctca
tcactgacttatttcttctcaagaaatggatctcacatgttggattaccagcttgctctt
cagcgatgtgttagaaaagatagtggaagagcttttggaaactggacacacactctaagt
ttatggtgcttgaatccagcagttgtgtttagagatgttgctgatctttctttatcagtc
atcttgacttctgggacactgtcaccaatgacttccttttcttccgagcttggagttcat
tttgaaactagtctagaagctcctcatgtaattgatgttgactcacaggtgtggcctgct
ataatctccactgggccaggcaattatcctctgaatgcaagttataaaacagcagatgga
tatgcattccaggatgcggttggaaaatctttagaggaaatcttcaagattgttccaggt
ggatgtctagtgttctttccaagttataaattgatggaaaaattatgcaaccgttggtct
gaaacaggtcaatggtctaggctaaatgcagaaaagtctctttttgttgaaccaagagct
ggaagccaagatgattttgaacttacaataaaggggtattatgattcaattcatcatgga
aaaagacctgcattgggagggaaaaaaaggattaagaaaagtgatctaaatcatgttcat
gcagtcgattccttacagaattctatgaaaggaggagctgctttacttggtgtttgtcga
ggaaaggtttctgaaggtattgatttctctgatgataatgccagagtagttattattgtt
ggtattccatttcccaacataaatgatattcatgttgcactgaagaagaaatttaatgac
acctacaaatcatccaaaaatctattgagtggaaatgagtggtactgccaccaagcattc
agagctttaaatcaagcagcagggcgctgtattcgacataaacttgattatggagcaatc
atcctattggatgaacgttttcgggaagaaagaaatagggcattcatttcaaagtggcta
agaagaccgctgagagtatatgacaggtttgatatgtcattggagggactaaaatcattc
tttgaggatgccaaggaacaatatggcataaatacagtgcatgccaccaagaagttgggt
ttaaatgacgaggatgtacaaaacaaggatcggagtgcaaggttcacaagaaagaaaaat
cagaaactgaacaagtctgataatggagatgggagagaaacatcattgattcagactaac
atctcttttcccacactaacccctcaagatcttgttgaaagcaagccattagctcaaaag
aatagtaacacatacaagtgtaaatatcactcacaatgctgtaatcagacagagccaagg
ttcactggggaatcatctgtggcaatcatacatgaggaaacttccattgtcaaggaaacc
ccttgcattgatgttgatgacgatctcagtagcccagattactctaagaatgacaacttt
ggttccaccatgattgaggccccagctccatctgcagatcacttatcaagtctttcaatg
tctttaaccagcggaagtaaaaattcttcaagggcccagtcttcaataacaattactcct
aaaaaaaatgtaattacaaatgatattctagaaaaggaatcatctttgaatttaagtgtt
aattctcacaatccaaaaaggagaaaggccatggtcactccgtttataaacctcgttgag
gaagaaaattttactgcatcttgtgccagtcctcttacatggtacagaaaaagctctgta
gatattagagagatatctcaaggaagtgaatgtggttttgagagaactttgaaatcaaat
tcttcttcattactgacaagcaatatacctggttcatgttcaccaactgcccctccaccg
gacaaaaggttacagatattttgttcacactgcaaaggtccattgggccgacctgagaat
catctctatcttacatgcttgttgaattcattatcaaaagtccatttaagatcccttttg
aaacagaggctgaaaacttgcactactgatagtgtaccagttattattactgattcttta
tttgttgaccaacgaatttgcaatagaatacccaaaagtgctccagaacagggtatttgg
tgtccagaagatgggtgtgtcttcagcactattttctgtcccttttgcagtaatatcgac
aatttgctaggagttcagatcatggctaccgattcatcaaatgttcagttacttgacaag
atattgtttttctttgactctttggaagtgaagagcggcgaggagtcagggaacattgct
tcaggggaaggggatctgttgccagttaatgactctggcatggagaaaattgctgtctta
aattctattgagaaatattcttatcatccccaaccagggaattcagaaatctcgaagact
actagaaaatctaagcaaaaactaagaggcttgcaccgtgcagcaaaccaaagttga
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