Cajanus cajan (pigeon pea): 109801053
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Entry
109801053 CDS
T04868
Name
(RefSeq) serine/arginine-rich splicing factor SC35 isoform X1
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109801053
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccaj03041
]
109801053
Spliceosome [BR:
ccaj03041
]
Common components
Common spliceosomal components
SR proteins
109801053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
109801053
NCBI-ProteinID:
XP_020217612
LinkDB
All DBs
Position
6:complement(4680544..4684625)
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AA seq
268 aa
AA seq
DB search
MSHFGRSGPPDISDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFA
FVRYKYADEAQKAVDRLDGRMVDGREITVQFAKYGPNAERIHKGRIIETAERSRHRSRSR
SPRKRYRDDYRDRDYKRRSRSRSYDRYERERHRGRDKDYRRRSRSRSTSLDYKGRGRGRF
DDERHSRSRSRSVDSRSPAQRSPSPRRSPSPQRSTSPQRSISPRKSPQGESPANHSPGGH
SPTPRSVSPRGRPDASRSPSPRNSNGDE
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgtctcactttggacggtctggtcctccagacatttccgacacttactctcttctcgtt
ctcaacatcaccttccgcaccaccgccgatgacctattccctctcttcgataagtatggg
aaggttgtcgacatcttcattcccaaagatcgaaggaccggtgagtcgaggggttttgct
tttgtgcgttacaagtatgctgatgaggctcagaaggccgttgataggctcgatggaaga
atggttgatggtcgtgaaataactgtccagtttgcaaaatatgggcctaatgctgagagg
attcacaaaggaaggattattgaaacagccgagagatcaaggcacaggtcaaggagccgc
agtcccaggaaaaggtatcgtgatgattacagagaccgggattataagaggagaagtcgt
agcagaagctatgataggtatgaacgtgaaaggcaccgtgggagagacaaagattatcgt
cgtagaagcaggagccgaagtactagtcttgattacaagggtcgtgggaggggacgcttt
gacgatgagcgtcatagtagaagccggagcagatcagttgatagccgctcccctgcacaa
cgcagtcctagtcctcgaaggagtccttcccctcagaggagcacttcccctcaaaggagt
atttcccctaggaaaagtccacagggtgaaagtccggcaaatcatagccctggtggacat
tctcctacccctcgcagtgtctcaccacgtggtcgccctgatgcttcacgaagcccttcc
cctcgtaattcaaatggtgatgaataa
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