KEGG   Cajanus cajan (pigeon pea): 109801187
Entry
109801187         CDS       T04868                                 
Name
(RefSeq) protein ANTHESIS POMOTING FACTOR 1
  KO
K14962  COMPASS component SWD2
Organism
ccaj  Cajanus cajan (pigeon pea)
Pathway
ccaj03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ccaj00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    109801187
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccaj03019]
    109801187
   03036 Chromosome and associated proteins [BR:ccaj03036]
    109801187
Messenger RNA biogenesis [BR:ccaj03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     109801187
Chromosome and associated proteins [BR:ccaj03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     109801187
    COMPASS/SET1 complex (yeast)
     109801187
SSDB
Motif
Pfam: WD40_Prp19 WD40_WDHD1_1st WD40 WD40_CDC20-Fz Beta-prop_EML_2 EIF3I WDR55 Beta-prop_CAF1B_HIR1 ANAPC4_WD40 NBCH_WD40 Beta-prop_TEP1_C Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_SPT8 Beta-prop_EML Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_SCAP KNTC1_N Beta-prop_WDR75_1st Beta-prop_VPS8 Beta-prop_NUP159_NUP214 PQQ_2 Beta-prop_WDR35_TULP_N Cytochrom_D1
Other DBs
NCBI-GeneID: 109801187
NCBI-ProteinID: XP_020217785
LinkDB
Position
6:complement(11935756..11947407)
AA seq 334 aa
MGGTQAEREEKVSLELSEEILQSMEVGMAFKDYNGRISSLDFHRASSYLVTASDDESIRL
YEVTGGTCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGH
HDRVVSLSLCSRKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAISYDDQGLVFAIAF
GGYIRMFDSRKYEKGPFEIFSVGGDISDANVVKFSNDGRLMLLTTADGHIHVLDSFRGTL
LSTYNVTPVSCNSTLEASFSPEGMFVISGSGDGSIYAWSVRSGKEVASWRSATSDTGPPV
IKWAPGSLMFATGSSELSFWVPDLSKLGSYVGRK
NT seq 1005 nt   +upstreamnt  +downstreamnt
atgggagggacacaagcggagagagaagagaaggtgtctttggaactcagcgaagaaatt
cttcagagtatggaagtaggaatggccttcaaagactataatggtagaattagctcgttg
gactttcacagggcatccagttatctagtgactgctagtgatgatgaatccattcgtctg
tatgaggttaccggtggaacttgtttgaagacaattaatagcaagaaatatggggttgac
ctggtttgcttcacatctcatcctacaactgtcatctactcttcaaaaaatggttgggat
gaatctttgcggcttctatcattgcatgataacaagtatttgagatatttcaaaggtcac
catgacagggttgtgtcactaagcttgtgctctcggaaagactgctttatatctggatct
ctagatcgaactgttttactgtgggatcagagggctgagaagtgccagggtcttttacga
gtacaaggaaggcctgctatatcatatgatgatcaagggcttgtctttgcaattgccttt
ggaggatacataagaatgtttgattctcgcaagtatgaaaagggtccctttgagatattt
tctgttgggggagatatttctgatgcaaatgttgtgaaatttagtaatgatgggagactc
atgcttttaactacggcagatgggcatattcatgtgcttgactcatttcgtggcacgctt
ttatccacatataatgtcacacctgtctcatgcaattccacattagaagcttctttcagc
cccgagggaatgtttgtaatatctggttctggggatggcagcatctatgcatggagtgtt
cgaagtggcaaagaagttgcaagttggaggagtgcaacttctgatactggacctcctgtt
ataaagtgggctcctggaagtcttatgtttgctactggatcatccgagttgtcattctgg
gttccagacttgtctaagttgggatcttatgttggaagaaagtag

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