Cajanus cajan (pigeon pea): 109801316
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Entry
109801316 CDS
T04868
Name
(RefSeq) RNA-binding protein Musashi homolog 2
KO
K14411
RNA-binding protein Musashi
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109801316
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccaj03019
]
109801316
Messenger RNA biogenesis [BR:
ccaj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
109801316
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
109801316
NCBI-ProteinID:
XP_020217947
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All DBs
Position
6:18178595..18183339
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AA seq
358 aa
AA seq
DB search
MEQRKLVVLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFASVDDAKE
VLSSEHILGNRTLEVKVATPKEEMRAPVKKVTRIFVARIPQSVTEATFRSHFEKYGDITD
LYMPKDQGSKMHRGIGFITFASADSVENLMSETHELGGSAVVVDRATPKDDDFKPIGRMP
QGGGYGAYNAYISAATRYAALGAPTLYDHPGPIYGRGEPARRTSKKIFVGRLPPEATAED
LRQYFGRFGRILDVYVPRDPKRTGHRGFGFVTFAEDGVADRVSRRSHEICGHQVAIDSAT
PVDDAGPSGNFMMNSMESFGGYGGPVRSYGRMYGSLDFDDWGYGIGRPSRADWRYRPY
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggagcagcgaaagcttgtggttttgggcattccgtgggatgtcgatacggagggatta
agagagtatatgagcaagtttggtgagcttgaagattgcattgtcatgaaggagcggtca
actggacggtctcgtggttttggatatgtcacatttgcttctgtggatgatgctaaggaa
gtattatcaagtgaacatattcttggtaataggacgctggaagtcaaagtagccacacca
aaggaggaaatgagggcaccagtcaaaaaagttactagaatatttgtagccaggattcca
caatcagtaacagaagctacttttcgaagtcattttgagaaatatggtgatataacagat
ttgtacatgccaaaggatcaagggtccaaaatgcatcgtggaattggtttcattactttt
gcaagtgcagattctgtggagaatttgatgtcagaaacccatgaactgggaggttctgct
gtggtggttgatcgagctacacccaaggatgatgactttaagccaattggcagaatgcca
caaggaggaggatatggtgcatacaatgcttatatttctgcagccactagatatgcagca
cttggtgctcctactttgtatgaccatcctggcccaatttatggacggggagagcccgct
cggagaactagtaaaaagatttttgttggccgtcttcccccagaggcaactgctgaggat
cttcgccaatattttggaagatttggccggatattagatgtttatgttccaagggatccg
aagagaacaggtcatagaggttttggatttgttacttttgctgaagatggtgtagcagat
cgtgtctctcgaaggtctcatgagatttgtggacatcaggtagcaatagattcggctacg
cctgttgatgatgcagggcccagtgggaattttatgatgaacagtatggaatcttttggg
ggatatggtggtcctgtgcgatcttatgggaggatgtatggtagcttagactttgacgat
tggggttacggaattgggagaccatcaagagcagattggaggtatagaccatactag
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