Cajanus cajan (pigeon pea): 109801462
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Entry
109801462 CDS
T04868
Name
(RefSeq) putative tRNA pseudouridine synthase Pus10 isoform X2
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccaj03016
]
109801462
Enzymes [BR:
ccaj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
109801462
Transfer RNA biogenesis [BR:
ccaj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
109801462
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pus10_C
Pus10_N_euk
Motif
Other DBs
NCBI-GeneID:
109801462
NCBI-ProteinID:
XP_020218124
LinkDB
All DBs
Position
6:complement(6608759..6624926)
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AA seq
489 aa
AA seq
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MEKKEDELQEVLRALPSDAVKDLLSHQVCARCILRVFGVQGRAYASPSLSSLFAQHSQTQ
LCRLCLGILQFTYSDDTKTLLQNDNLPLLIAQTVQRQAYHFHSFSLEVSIPPIVLDNDNS
LRSYMKTKYGSQPWFQQNLHIGCISAKDALKFSLVYPLEDLLECKSSMGPFRIRLTFCHA
KASKGDEKCSDGAESCKRRKIGESNAVGERPTSSSVENDSSDCCEFLLEKANEPCHLTYF
CYRTPFYFGGRYLKYSRNVSQTRWIIDDERMGEASVEEIIGGNILQACQGDSFKFHAAGR
EDIDVRMLGPGRPFIVEVQNARHIPSELSVKDMEKTINSMEFSLNKLVRVKNLKLVGSDG
WNLMREGEAEKQKQYAALVWISRPIKDEDFQCVSSLKDLKVLQRTPIRVLHRRSPLEREK
IIHWMTMETIAGSSQYFLLHLCTQAGTYIKEFVHGDLGRTHPSIGSILGCRAEILQLDVT
DIKMECFLT
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaaggaagacgaattacaggaagtgcttcgcgctttgccttccgacgccgtc
aaggatttgttgtctcaccaggtatgtgcccgctgcatcttgcgcgtgtttggggtccaa
ggccgcgcctatgcctctccctccctctcttctctcttcgcacaacattcccaaacgcaa
ctttgcaggctttgcttagggatcctgcagttcacgtattctgatgacaccaaaaccctc
cttcaaaacgacaatctccctcttctcattgctcaaaccgttcaacgacaagcctatcac
tttcattccttttcccttgaagtttccatcccacctatcgttctcgacaatgacaactct
cttcggtcatatatgaaaaccaaatacgggtcccaaccttggttccaacaaaacttgcat
attggatgcatctctgcaaaggatgccttaaaattttctctcgtatatcctcttgaagat
cttctggaatgtaaatcaagtatgggccctttccgcattcgtttgacattctgtcacgcg
aaagcttcaaaaggggatgagaagtgttcggatggtgctgagagttgcaagagaagaaaa
ataggcgagtccaatgcagttggagaaaggcctactagcagttctgttgaaaatgattcc
tcagactgctgtgaattcttgctagaaaaggcaaatgagccttgccatcttacttacttt
tgctacaggacacctttctattttggtggaagatacctaaagtattcacggaatgtgagt
caaacacgctggattattgatgatgaaagaatgggagaagcatcagtcgaggaaataatt
ggtggaaacatcctccaagcttgtcaaggtgatagttttaagtttcatgctgcaggcaga
gaagatatcgatgtccgaatgttgggtccaggcaggccatttattgttgaggtgcaaaat
gcacgacacatcccatctgaactgtctgtaaaagatatggagaaaacgataaatagcatg
gagtttagtttgaataaattggttagggtaaaaaatcttaaacttgttggtagtgatggc
tggaacctaatgcgagaaggtgaagcagagaagcagaaacaatatgctgctttggtgtgg
atttctcgaccaataaaggatgaagattttcaatgtgtttcttctctcaaggatttgaaa
gttttgcagaggactccaataagggtgctacatcgtcgcagtcctttagagcgggaaaag
attattcattggatgacaatggagacaattgctggaagttctcaatattttcttctgcac
ttatgtacacaggctgggacctacatcaaggaatttgttcatggagaccttggacgcacc
catcctagcattggatcaattttgggttgcagagctgaaattttgcagcttgatgtcaca
gacatcaaaatggaatgtttcctgacctaa
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