Cajanus cajan (pigeon pea): 109801832
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Entry
109801832 CDS
T04868
Name
(RefSeq) transcription factor IIIB 70 kDa subunit isoform X1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccaj03021
]
109801832
Transcription machinery [BR:
ccaj03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
109801832
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRF1
TFIIB
Zn_Ribbon_TF
DmmA-like_C
Motif
Other DBs
NCBI-GeneID:
109801832
NCBI-ProteinID:
XP_020218549
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Position
7:6879380..6902265
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AA seq
625 aa
AA seq
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MVYCNHCAKIVVGERLDDGYLCCGSCGRVLEDYFFAEEPTFVKNAAGQSKLSGNYVRTVQ
SEFSDSRQRTLDRAYDEIKYLSYGLGVNDESMTDQALTFYKIALERNFTRGRKSEQVQAA
CLYIAFRHNNKPYLLIDFSNYLRTDVYVLGAVFLQLCQVLRLGEHPIVQKPVDPSLFIHR
YTMNLLKHGSKAVSDTALTIVASMKRDWMQGGNLVDYAVQHYTYLLLHMVLSALSRILRP
LIFSFAMQLRIVHVCEATLTKRLVEFECTKSSSLTIEELDTMAKEHEKNPMVMPAGELKD
CISKDLLCEHRDSGVPHFALGLCEACYKDFDKLSGGLGGGLDPPAFQRAERERMKKTLPK
ESVDETSILGNSSNDQFKSHKEDLPAYVPESIGANVEREGTKDGKYDDSHREDESETFSD
IDDEDVDVYLHDEEGKHIKKILWETANQEYLEEQAAKEAAAAASKKAFEANFENCSEDLL
AARELAASVNEAVAKSRKETRQRRAHEAKNLGPAQSAAEAFGQMSNKKRHLQSLKSKVNF
DILGEFLFNEMEDGVDPKKQKKVRFDPPPDNQVEDKNEDGMGSVDDFEDEGDMYKNASST
ENMYEKYFSEDSSFGYNDDDYSKVA
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggtatactgcaatcactgtgctaaaattgttgtcggtgagcgactagatgacggttac
ttatgttgtggaagctgtgggagggtgttggaagattacttttttgctgaggagcctaca
tttgttaagaatgcagcagggcagagtaaattatctggaaattatgtacgaacagttcaa
agtgagttctctgattcacgtcaaaggactttagatagagcatatgatgaaataaaatat
ttaagttatggccttggagtgaatgatgaaagtatgactgaccaagctttgaccttttat
aaaatagcacttgagcgaaatttcacccgtggacgaaaatcagagcaagtacaggctgct
tgtctctatattgcattccggcacaacaataagccataccttcttattgatttttcaaat
tatttaaggacagatgtttatgtgctaggagcagttttcttgcagctttgtcaagtgtta
aggcttggagagcacccaattgttcaaaagcctgttgatcctagtctttttattcataga
tataccatgaatttgttgaagcatgggagtaaggctgtctctgatactgcgttgaccatt
gttgcaagcatgaaacgtgactggatgcagggaggaaacctagtggattatgcggtgcag
cattatacatatctgctcttgcacatggttttaagtgctctaagccggatattgcgtccc
ttgattttctcatttgcaatgcagcttagaatcgtccatgtatgtgaagcaacattgacc
aaacgattggtagaatttgagtgtacaaagtcttctagcttgacaattgaggagttggat
acgatggcaaaagagcatgaaaaaaatccaatggtaatgccagcaggtgaattaaaagat
tgtatttcaaaagatcttctgtgtgagcacagggatagtggggtgccccattttgcactt
ggattatgtgaagcatgctataaggattttgataagctctctggtggacttggtggtggt
ttggatccccctgcgttccagcgtgctgagagggaaagaatgaaaaaaacacttcccaag
gagagtgtcgatgaaacatctattttggggaattcatcaaatgatcagtttaaaagccac
aaagaggatttgcctgcctatgtgccagaaagtattggggcaaatgttgagcgtgagggc
accaaagatggtaaatatgatgattcacatagagaagatgaatcagaaactttctctgat
atagatgatgaagatgttgatgtgtaccttcatgatgaggaggggaagcatatcaagaag
atactatgggaaacagcgaaccaagagtatcttgaggagcaggcagctaaggaagcagct
gcagcagcaagtaagaaagcttttgaggcaaattttgaaaactgttcagaggatttacta
gcggcaagagagcttgctgcatctgttaatgaagccgtggcaaaatccagaaaggaaaca
agacagagacgcgcccatgaggcaaaaaatttagggccagctcaatctgctgctgaggct
tttggccaaatgtctaataaaaaaaggcacttgcagagtctcaaatctaaagtcaacttt
gatatcctgggtgaatttctatttaatgaaatggaagatggcgttgatcccaagaaacag
aagaaagtgcgatttgatccgcccccagataatcaagttgaggacaaaaatgaggatggg
atgggatcagtggatgattttgaagatgaaggtgatatgtataaaaatgcctcctctact
gaaaatatgtatgagaaatacttctctgaggatagtagtttcggctataatgatgatgat
tactcaaaagtagcttag
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