Cajanus cajan (pigeon pea): 109801854
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Entry
109801854 CDS
T04868
Name
(RefSeq) RAB6A-GEF complex partner protein 1
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccaj04131
]
109801854
Membrane trafficking [BR:
ccaj04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
109801854
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIC1
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_RSE1_2nd
Beta-prop_WDR19_1st
WD40_Prp19
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
109801854
NCBI-ProteinID:
XP_020218579
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Position
7:10446991..10461342
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AA seq
1121 aa
AA seq
DB search
MYMAYGWPQVIPLEQGPCPSAQNIVYLKLINRILLVVSPTHFELWSTSQHRVRLGKYKRS
SDSLQREGENLKAVWSPDAKLIAILTTSFFLHIFKVQLSDKRIHTGGKQPSAVCLAAISL
LLTEQVPLAVKDLTVSNIVSDNKHMLFGLSDGTLYSMSWKGEFYGASQFDPHPTASFDNS
QMPLTLENGLSPKSHPKVLMSNHIIPRKSEINQLELCLPLRLLFVLYSDGQLVSCSVSKK
GLRQVDCIKAEKSLACDDAVCASVAQEQHILAVGTKRGTVELYDLAESASLIRAVSLYDW
GYSVDDTGPVSCIAWTPDNSAFAVGWKLRGLTVWSVSGCRLMSTVRQIGLSSMSSPIAKP
NHDCKYEPLMGGTSLMQWDEYGYRLYAIEAGSSERILSFSFGKCCLSRGVSGTTYIRQVI
YGEDRLLIVQSEETDELKMLHLKLPVSYISQNWPVQHVAASQDGMYLAVAGLHGLILYDI
RMKRWRVFGDVTQEQKIQCKGLLWLGKIVVVCNYVDSSNTYELLFYPRYHLDQSSLLCRK
PLFAKPMVMDVYQDYMLLTYRPFDVHIFHVKLFGELTPSGNPDLQLSAVRELSIMTAKSH
PAAMRFIPDQLPRESISNNYVSSDSLTREPARCLILRANGELSLLDLDDGRERNLTDSVE
LFWVTCGQSEDKTNLIEEVSWLDYGHRGMQVWYPSPGANSFKQEDFLQLDPELEFDREVY
PLGLLPNAGVVVGVSQRMSFSASAEFPCFEPSPQAQTILHCLLRHLLQRDKIEEALRLAE
LSAEKPHFSHCLEWLLFTVFEADISRPNVNKNQISVVIPAKSSLLEKTCDLIRNFPEYLD
VVVSVARKTDGRHWADLFAAAGRSTELFEECFQRRWYRTAACYILVIAKLEGPAVSQYCA
LRLLQATLDESLYELAGELVRFLLRSGREYDQASTDSDKLSPRFLGYFLFRSSERKQSLD
KSPSFKEQSAHVTSVKNILENHASYLMSGKELSKLVAFVKGTQFDLVEYLQRERYGSARL
ENFASGLELISQKLQMGTLQSRLDADFLLAHMCSVKFKEWIVVLATLLRRSEVLFDLFRH
DVRLWKAYSTTLESHPAFTEYQDLLVDLEEKLSSVANVVEK
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atgtatatggcatatgggtggcctcaggtcatccctctggagcaaggaccgtgtccctct
gcacagaacattgtgtacctcaaactcatcaatcgcatcttgctcgttgtctcccccact
cattttgaactctggagcacttcccagcatagagtgagattggggaagtacaagagaagt
tcggattcattgcagagggaaggagaaaacttgaaggccgtgtggagccctgatgccaaa
ttaatcgctattcttacaacttcgttctttcttcacattttcaaggtccaactctcggat
aaaagaatacacaccggtgggaaacaaccctctgctgtgtgtctagctgctatttctctt
ctgctcacagagcaagttcctttggcagtaaaggatttgacggtgagcaatattgttagt
gataacaaacatatgctatttggactttctgatggaactttatacagtatgtcttggaaa
ggggagttctatggggcttctcaatttgatccacatcctactgctagctttgacaattct
caaatgccacttactctagagaatggtctttctcctaaaagtcacccaaaggttcttatg
tccaatcacattattcctagaaagtctgaaatcaaccaactggagctttgccttccattg
aggttgctatttgtcttgtattctgatgggcaacttgtctcatgttctgtgagtaaaaaa
ggcttaaggcaagttgactgtatcaaagcagaaaagagcttggcttgtgatgatgctgta
tgtgcttcagtagctcaagagcagcacattcttgctgttggtaccaaaagagggacagtg
gagttgtatgatttggctgaatcagcatcacttatacgtgcagtctctttgtatgattgg
ggatattcagttgatgacactggccctgttagttgcattgcttggacacctgataattcc
gcttttgcagttgggtggaaactaaggggtcttacggtttggtctgtttctgggtgtcgc
ctgatgtcaacagtccgacaaataggtttaagttccatgtcttctccaattgctaagcct
aaccatgattgtaagtatgaaccattgatgggtggtacctcactgatgcagtgggatgaa
tatggatatagactttatgctattgaggctgggtcttcagagagaattctatcgttctca
tttgggaaatgctgtcttagcagaggtgtttcaggcactacatacatccggcaagtgatt
tatggggaagaccgtttactcattgtgcagtcagaagagactgatgaactaaaaatgcta
catcttaagcttccagtttcttatatttcccaaaactggcctgttcaacatgtggcagct
agccaggatgggatgtacttagctgttgctggtcttcatggtttgatattatatgatata
cgaatgaagagatggagagtatttggagatgttacacaggagcaaaagattcagtgtaaa
ggtttgttatggctggggaagattgttgttgtctgcaactatgttgattcatccaacacg
tatgaattgctcttttaccctagatatcaccttgatcaaagttcattactctgtcgaaaa
ccattgtttgctaaaccaatggtgatggatgtataccaagattatatgctgcttacatat
agaccgtttgatgtccacatattccatgtgaaattattcggtgaattaactccttcagga
aatccagatttacagctttctgcagtacgagaactttcaattatgactgccaagagtcat
cctgcagcaatgcgattcatacctgaccaactaccaagagaatctatttcaaacaattac
gtttcatcagattcattaacaagagaaccagcaagatgtttgatattgagggcaaatggg
gagctttcacttcttgatctggatgatggacgggagagaaatcttactgattcagttgaa
ctattttgggtcacctgtggccagtcagaggataaaacaaatttgattgaggaagtttca
tggttagattatggtcatcgaggcatgcaggtttggtatccatctccaggtgccaattct
tttaagcaggaagatttcttacagttggacccagagttggagtttgatcgtgaagtatac
cctttgggacttcttccaaatgctggtgtagttgttggtgtttcccagagaatgtcgttt
tcagcaagtgctgaatttccatgttttgaaccatctcctcaagcacaaacaatactgcat
tgcctgctccgccatcttcttcagagggacaaaatagaggaagctttaaggctggcagag
ctatcagctgagaagcctcatttttcacattgtctagagtggcttctttttacagtattt
gaagcagatatatccaggccaaatgtgaacaagaaccaaatctcagttgttatacctgct
aaaagctctcttttagagaagacgtgtgacctgatcaggaactttccagagtaccttgat
gttgttgtaagtgttgcaagaaaaactgatggtcgtcattgggcagatttgtttgctgct
gctggaagatcaacagaattgttcgaggaatgctttcaacgtagatggtaccgcactgca
gcttgctatatacttgtgattgccaaacttgaaggtcctgctgtcagtcagtactgtgct
ttacggttattacaggcaacactagatgaatcattgtatgagcttgctggggagctggtg
cgattcttgttaagatctggtagggagtatgaccaagcatcaaccgattcagataaattg
tctccaagatttttaggctattttctttttcgttctagtgagcggaagcaatcattagat
aaaagcccctcattcaaagaacaaagtgctcatgttacctctgttaagaatattttagaa
aaccatgctagttatctaatgtctggtaaagagctctccaagcttgttgcatttgtaaaa
ggcactcagtttgatttagtggagtatctgcaacgtgaaagatatgggagtgctcggttg
gagaattttgcatctgggcttgaattaataagccaaaagcttcaaatgggaacattacag
agccgtttggatgctgactttctcctggctcatatgtgctctgtcaagtttaaggaatgg
atagttgtcctggctactctcttaagacgttctgaggttctttttgacttattccgtcat
gatgtccggctttggaaagcgtacagcacaaccctggagtcacacccagcatttactgaa
tatcaagatttgctggtagacctggaagagaaactttcatcagttgcaaatgtggtagaa
aaatga
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