KEGG   Cajanus cajan (pigeon pea): 109801884
Entry
109801884         CDS       T04868                                 
Name
(RefSeq) UBP1-associated protein 2A
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
ccaj  Cajanus cajan (pigeon pea)
Pathway
ccaj03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccaj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109801884
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccaj03019]
    109801884
   03041 Spliceosome [BR:ccaj03041]
    109801884
Messenger RNA biogenesis [BR:ccaj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     109801884
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     109801884
Spliceosome [BR:ccaj03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    109801884
SSDB
Motif
Pfam: RRM_1 RRM_7 CDC45 RRM_Nup35 Rrn7_cyclin_N Prothymosin CCD97-like_C Cut8 Nop14
Other DBs
NCBI-GeneID: 109801884
NCBI-ProteinID: XP_020218630
LinkDB
Position
7:complement(8388174..8394562)
AA seq 473 aa
MGRKRKLVPKSSQPAEPPLKLQQSQPLPQNAPQQYQEEESEEEEEVEEVEEEEEEEEEEE
EEEEESEDDQPQQQQQQDFDDDPIPKLLEPLSKDQIVNLLCEAAATHRDVAERIRKAADE
DPVHRKIFVHGLGWDTTAGTLISAFRQYGEIEDCKAVTDKVSGKSKGYGFILFKTRRGAR
NALKQPQKKIGNRMTACQLASIGPVSNNTPQQQQQQPQAAAAPPAQAYSEYTQRKIYVSN
VGADLDPQKLLVYFSRFGEIEEGPLGLDKVTGKPKGFCLFVYKSAESARRALEEPHKDFE
GNILHCQKAIDGPKPGKLQQQQYGNVGQAQRAQFQRNDNSSAAGYVGGAMAAQPGHLMAP
AGPAIGFNQAAAAQAALNPALGQALALLASQGTMGLTNLLGGIGTSAAVNPVVPAAGAGV
QSGYNAQASISPGVIGGYGNQVGLQTAYPNQQIGQGGSGRGQYGGGAAPYMGH
NT seq 1422 nt   +upstreamnt  +downstreamnt
atggggaggaagcgaaagctagttcccaaatcttctcaacccgccgaacccccgctcaag
ctgcaacaatcccaaccacttccccaaaatgcccctcagcagtaccaagaggaagaatcc
gaggaagaagaagaggtagaggaagtggaagaggaagaagaggaagaggaggaggaggag
gaagaggaggaagaaagcgaagacgaccagccacagcagcagcagcaacaagacttcgac
gacgatccgatccccaagcttctggagcccttgagcaaggaccagatcgttaacctactg
tgcgaggcggcggcgacccaccgcgacgtggcggagcggatccggaaggcggcggacgag
gaccccgtgcaccggaagatcttcgtgcacggcctgggatgggacaccaccgccggaacc
ctaatcagcgcgttccgccagtacggcgagatcgaggactgcaaggccgtcaccgacaag
gtctccggcaagtccaagggctacggcttcatcctctttaagacgcgccgtggcgcgcgc
aacgccctcaagcagccgcagaagaagatcggcaaccgcatgacggcgtgccagctcgcc
tccatcggccccgtcagcaacaacaccccgcagcagcagcagcagcagccgcaggcggct
gcggcgccgcctgcgcaggcttattcggagtacacgcagaggaagatttacgtgagcaac
gttggtgccgatttggacccgcagaagcttctcgtgtacttttcgcggttcggtgaaatt
gaggaagggccgttggggcttgacaaggttacgggaaaacccaaagggttttgcttgttt
gtttacaagagtgcagagagtgcgaggagggccctagaggagcctcacaaggatttcgag
gggaatattttgcattgccagaaggccattgatgggcccaagcccgggaaattgcagcag
cagcaatacgggaatgttggtcaggcccagagggcccagtttcagaggaatgataattct
agtgctgctggctatgttggtggtgctatggcggcgcagccggggcacttgatggcgccg
gctgggccggcgattgggtttaatcaggcggctgctgcgcaggccgccttgaatccggcg
ctggggcaggcgttggcgctgctggcttcgcagggaacgatggggctgactaatttgttg
ggtggtattggaacgagtgctgcggtgaaccctgttgtgcctgcagctggggctggagtg
caaagtggttacaatgctcaggcgagtataagtccgggtgttattggaggatatgggaat
caggtggggttgcagacggcttatccgaatcagcagatagggcagggtggttccggaaga
gggcagtatggtggtggtgctgcgccttacatggggcactag

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