Cajanus cajan (pigeon pea): 109801889
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Entry
109801889 CDS
T04868
Name
(RefSeq) ATP-dependent RNA helicase DEAH13 isoform X1
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccaj03009
]
109801889
Enzymes [BR:
ccaj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109801889
Ribosome biogenesis [BR:
ccaj03009
]
Eukaryotic type
90S particles
Helicases
109801889
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHX37_C
OB_NTP_bind
Helicase_C
HA2_C
DEAD
WHD_HA2
AAA_22
ATPase
nSTAND3
AAA_19
AAA_RNF213_3
Motif
Other DBs
NCBI-GeneID:
109801889
NCBI-ProteinID:
XP_020218637
LinkDB
All DBs
Position
7:complement(13335069..13341541)
Genome browser
AA seq
1326 aa
AA seq
DB search
MQTLENFGDNIEFNSQSLGDGDSNALILPAKRMKKRKGKEQEHGKLQSNKKQKLSKPQKR
KMKKKLENDKEKQLLLEKAIKTLNENTLPEYAYPLLLSTCNINRDETAKEKRRRAVHLLK
EGLEVPDNGLSKKPETDEIHLAQADEVKEIDIIQIQPIRSEEVLNTISVPLESSQEPVPG
NDVENYKYVSEPLADISIKQLDEIRCSPMSCSNDEIKSTKSKDKSDDNQDSNFKEFGNLL
DYSSTRPPNVPTVVHVHRPTEVEDKRKDLPIVMMEQEIMEAINDRSSVIICGETGCGKTT
QVPQFLYEAGYGSSKGVIGVTQPRRVAVLATAKRVAYELGFRLGKEVGFQVRYDKKIGES
CSIKFMTDGILLREVQNDILLRRYSVIVLDEAHERSLNTDILIGMLSRVIKTRQMIYNEQ
KKLILSGESISPEKIIFPLKLVLMSATMRVQDFTSGKLFHTPPPVIEVPTRQFPVTAYFS
KKTEKTDYIGEAYKKVLAIHKRLPSGGILVFVTGQREVEDLCRKLRKASKEFIKKRVEES
VESDSTVVHETNSIEGVNINEINEAFMVQGSSSFQQTDRFSGYDEDEDNVNWNESDFSYD
SETESELEFDDDDDLELSENKSNIVDALGQVESLASLKAAFEKLSGQATLSSSNGEQTFS
ANIEGNVEETKVSREKRGRENCNLSPGALFVLPLYAMLPAAAQLRVFEEVKEGERLVVVA
TNVAETSLTIPGIKYVVDTGREKVKNYDPSNGMETYEVQWISKASAAQRAGRSGRTGPGH
CYRLYSSAAFNNEFPEHSPAEVEKVPVHGVVLLLKSMHIKKVANFPFPTSLKAASLLEAE
NCLKALEALDSNDELTLLGKAMAHYPLSPRHSRMLLTLIKNTRHEHKCNQNMLLAYAVAA
AAALSLSNPFVMQYEDDSSRDSEMSEKPSMRDSEKDTAKKEKSKRKKLKETAKVAREKFR
VLTSDALTIAFALQCFEHSQKSVQFCDDNALHFKTMDEMSKLRQQLLKLVFYQSDKGGFE
KEYSWNHGTLEDVECAWQVSSGKYPLSLVEERLICQAICAGWADRVAKRVTASSRASDGE
RTSRILRYQSCMVDESVFLHRWSSVSIVGPEFLVYNELLETKRPDKEGITSAKRAYMHGV
TSVEPAWLVEHARSSCILSPPLLDPRPYYDAQTDQVKCWVIPTFGRFCWELPKYSLPISN
DEHRVQVFAYALLEGQVCPCLKSVRKYMSAPPESIMKREAFGQKRVGNLLAKLKSRLIDS
SAMLRMVWKENPRELFSEILDWFQKSFHRQFEDLWLQMLHELLMETQERPLHKSSKKKKG
KSKTLR
NT seq
3981 nt
NT seq
+upstream
nt +downstream
nt
atgcaaactttggaaaatttcggagacaatatcgagttcaattctcaaagtttgggagat
ggtgatagtaatgcactaattttgcctgctaagagaatgaagaaaaggaaagggaaggaa
caggaacatggaaaactccaatcaaataagaaacagaaattgagcaagcctcagaaaagg
aagatgaagaagaagttagagaatgacaaggagaagcaacttctgctggaaaaagccatt
aagacattgaatgaaaacacacttccagagtatgcatatcctcttttgctgtcaacatgc
aatataaatcgggatgaaactgcgaaggagaagcgtagaagggctgtgcatttattgaaa
gaaggattggaggttccagataatgggctgtctaagaaacctgaaacggatgagattcat
ttagcccaagctgatgaagtcaaagaaattgacatcattcaaattcaacccattagatca
gaagaagtcttaaatacaatttccgttcctttggagtcctctcaagaaccagttcctggc
aatgatgttgaaaattataaatatgtttctgaacctcttgctgacatttccattaagcaa
ctggatgaaatcagatgctctcccatgtcttgttctaatgatgaaataaaaagcaccaag
tcaaaggataagtcagatgataaccaagattccaatttcaaagaattcggcaaccttctg
gattattcttcaactaggcctccaaatgttcctactgttgtgcatgtgcacagaccaaca
gaagttgaagacaaaagaaaggatctgcctatagtcatgatggagcaagagataatggaa
gctataaatgaccggtctagtgttatcatatgtggagaaactgggtgtggtaaaacgact
caagttcctcagtttctttatgaagctggctatggttcaagtaagggtgttattggtgtt
actcaacctcgccgtgtggctgttcttgccacagctaagcgtgtggcatatgagcttggt
tttcgtctagggaaggaggttggttttcaagtcagatatgacaaaaagattggagaaagt
tgttctatcaagtttatgactgatggaattttgctacgagaagttcagaatgatattttg
ttgaggcgttattctgtcatagttcttgatgaggctcatgagaggagcttgaacacagac
attctgatcgggatgctctcacgtgtaattaaaactcgccaaatgatttataatgaacag
aaaaaattgatactttcaggagaaagcataagtcctgaaaaaatcatttttccattaaaa
cttgttcttatgagtgccaccatgcgagtacaagacttcacttctggaaagttattccat
actcctccacctgttatagaagttcctacaaggcaatttccagtaacagcatacttctca
aagaaaacagagaaaacagattacattggagaagcatataagaaggtcttggcaattcac
aagaggttgccatctgggggcatacttgtctttgttactgggcaaagggaagtagaggac
ttatgcaggaagttacgtaaagcatcgaaggagtttatcaagaaaagagttgaagagtct
gtggaaagtgatagcactgtggtccatgaaacaaattctattgagggagtaaatattaat
gagatcaatgaagcatttatggtccaaggaagttcatccttccagcaaactgatagattt
agtggttatgatgaagatgaggataatgtaaattggaatgaatctgatttttcttatgac
tcagaaacagaaagtgaactggagtttgatgatgatgatgatcttgagctatcggagaac
aagagtaatattgttgatgccttaggacaggtggaaagtcttgcttcactgaaggctgct
tttgaaaaattgtctgggcaagccacattaagctcctcaaatggagagcagacattttct
gcaaatatcgaaggaaatgtagaggaaacaaaagtttccagggagaaaagaggtcgagaa
aattgtaatctttctccaggtgcactctttgttctacctctgtatgccatgcttcctgca
gcagctcaacttcgtgtgtttgaagaagtcaaggagggagagaggcttgttgttgttgcc
acaaatgttgctgaaacatctttaacaattccagggataaagtatgtggttgataccgga
agagaaaaggtgaagaattatgacccctctaatggcatggagacatatgaagtacaatgg
ataagtaaggcatctgccgcacagcgtgcaggcagatctggaagaactggacctggacac
tgctatcgtctctattcttctgcagcctttaataatgaatttcctgagcactctcctgct
gaagttgagaaagtacctgttcatggtgttgtccttctcttgaaatccatgcatattaaa
aaggttgcaaacttcccatttcctacttctcttaaagctgcttctctgcttgaggctgaa
aattgcttgaaagctcttgaagcacttgatagcaacgatgaacttacacttttggggaaa
gccatggcacattatcccttgagtcctcgtcattctagaatgctcctcactcttattaaa
aatacaagacatgagcataaatgtaatcaaaatatgcttttggcatatgctgttgcagct
gctgcagctttgagtttgtcaaatccttttgtaatgcaatatgaagatgacagcagcaga
gattcagagatgtctgagaaacctagcatgcgagacagtgagaaagacactgctaaaaaa
gaaaaatccaagagaaagaaactaaaagaaacagctaaagttgcacgtgaaaaattccga
gttctcactagtgatgccttaaccatagcttttgctttgcagtgttttgaacattcacaa
aaatcagtacaattctgcgatgacaatgcattgcatttcaaaaccatggatgaaatgtcc
aaacttcgacaacagctacttaaactggtcttttatcagagtgataaaggtggttttgaa
aaagagtactcatggaatcatggaacattagaggatgtagaatgtgcttggcaggtttct
tctggaaaataccctctttctctggttgaggaaaggctcatctgtcaagcaatatgtgct
ggctgggcagatagggttgctaaacgtgttacagcttcttctagggcctctgatggagag
agaacttctcgcattttaaggtaccaatcatgcatggttgatgaaagtgttttccttcat
cgttggtcatcagtttccattgtaggccccgagtttttggtttacaatgaactattagag
accaaaagaccagacaaagaagggataacaagtgccaagagagcatatatgcacggagta
actagtgtagagccagcttggctcgttgagcatgcaaggtcttcatgcatcttatctcct
ccccttctggatcctagaccttactatgatgctcagactgaccaagtaaaatgttgggta
atcccaacctttggacgtttctgttgggagcttccaaaatattcattgcccattagcaat
gatgaacaccgggtgcaagtgtttgcctatgcattgcttgaaggccaggtgtgtccctgt
ttaaaatctgttcgaaaatacatgtctgctccacctgaaagtattatgaagagagaagca
tttggtcaaaaaagggtgggaaatcttttagccaagttaaagagcaggctgattgatagt
tctgctatgttaagaatggtgtggaaggagaatccaagggaattattttcagaaattttg
gattggtttcagaagagttttcacagacaatttgaagacttgtggttacaaatgcttcat
gaactgcttatggagacacaagaacgccctctgcataaaagttctaaaaagaagaaagga
aaatctaaaacactacgataa
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