Cajanus cajan (pigeon pea): 109802102
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Entry
109802102 CDS
T04868
Name
(RefSeq) THO complex subunit 5B
KO
K13174
THO complex subunit 5
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109802102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccaj03019
]
109802102
03041 Spliceosome [BR:
ccaj03041
]
109802102
Messenger RNA biogenesis [BR:
ccaj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
109802102
Spliceosome [BR:
ccaj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
109802102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
109802102
NCBI-ProteinID:
XP_020218905
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All DBs
Position
7:complement(19214254..19220011)
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AA seq
800 aa
AA seq
DB search
MEDGEIEEGPMGGVDEDEQSSEPRKLEESPFEILRTSKTSVENIVADILSIKKEAKPKQH
LRDLVTQMFLHFVTLRQANRNILLEEDRVKTETERAKAPVDFTSLQLHNLMYEKSHYVKA
IKACKDFKSKYPDIDLVPEEEFFRDAPQDIKDSVLSSDAAHNLMLRRLNFELFQRKELCK
LHEKLEQQKKILLETISNRKKFLTSLPSHLKSLKKASLPVQNQLGLHHTKRLKQHHSAEL
LPPALYVIYSQLLAQKEAFREPIDLEIVGSLKDAQAFARQQAHKDTDMSSTADSSKLEDD
APDEEEDGQRRRKRPRRVQVKDSLDQGGIFQAHPLKIIIHLYEDETSGPNSAKLITLRFE
YMVKLNVVCVGIEGSNDGPENDILCNLFPNDTGLELPHQSAKLIVQDAKTFDTQRTSRPY
KWAQHLAGIDFLPEVSPLILTDNDGAVKNENVISGLSLYRQQNRVLTVLQRIRARRKAQL
ALLEQLESLTKLEWPHLSCKSVPWALHTPLCNLDSWSPVRVPPVPRESSSPAVVDKEEHV
QEPMDADINERSGATKAELESITEDGELPTLLPNMSKLDHSTQLNLISKSIIPPLNKIRS
QSFKKLDDSSDFLLDIESDLDEPAQIEQEHENILSRKSVSWMDYGLREFRLVLCRKITAD
ESNVNLEAKIKISMEYPLRPPLFALSICCISSGENHDGTGLEWYNELRAMEAEVNLHIIR
MLPVDQQNYILAHQVSCLAMLFDYYLDEASPSSERTNCTSVVDVGLCKPVNGRFLGRSFR
GRDRRKMISWKDMNFNSSRP
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggaagacggtgaaatagaagagggaccaatgggtggtgtagacgaagatgaacaatcc
tcagagccgcgcaaattggaggaatcgcccttcgaaatcctgcgtaccagcaagacttcc
gttgagaacatcgtcgccgatattctctccattaaaaaggaggctaaacccaaacaacac
cttcgagatctcgtcactcaaatgttcctgcacttcgtcactctccgccaggcaaatcgc
aatatcttgcttgaggaagacagagtgaaaaccgaaacggagcgtgccaaggctcccgtg
gatttcacatcgctgcagcttcacaaccttatgtacgagaaaagccactacgtgaaggca
atcaaggcttgcaaagacttcaagtccaaatatcccgacattgacctcgttcccgaggag
gagtttttccgcgacgctccacaggatatcaaggactccgttttgtcaagcgacgctgcg
cacaatctcatgctcaggaggctcaatttcgagttattccagcgcaaagaactctgcaaa
cttcacgagaaactggaacaacaaaagaaaattcttttggagactatttcaaaccgaaag
aagttcctgacaagtctcccttcacatctcaagtctcttaagaaggcttccttgccagta
caaaaccagctagggcttcatcatacaaagagattaaagcagcaccattcggcagagttg
cttcctccagccctttatgtgatctactcacaactgttggctcaaaaggaggcctttaga
gaacccattgatctggagattgtaggaagcctgaaagatgctcaagcttttgctcgtcaa
caagctcacaaggacaccgacatgtcctctaccgctgatagttccaaattggaagatgat
gctcctgatgaagaagaagatggtcagagacggaggaaaaggccaaggagggttcaagtc
aaggatagccttgatcagggtggaatatttcaagctcatccacttaaaatcattatccat
ctgtatgaagatgagacttctggtcctaactctgcaaaactcattactctaaggtttgag
tacatggtgaagttgaatgttgtatgcgttggaatagaaggatctaatgatggtccagag
aatgacatcttgtgcaatttgttccctaatgatacgggtcttgagcttcctcaccagtca
gccaaactcattgttcaggatgctaaaacattcgatacacaaagaacttcacgtccttac
aaatgggctcagcaccttgcagggattgatttcttgcctgaggtgtctcccttgattctt
acagacaatgatggagcggtcaagaatgaaaatgttatatctggtctttcactatatcgt
cagcagaaccgagtactgacagttctgcagagaatccgtgcaagaagaaaagctcagttg
gctcttctggaacagctagaatctctgacaaagcttgagtggcctcatctgtcctgcaaa
agtgttccgtgggctttgcacactcctctgtgtaatttggatagttggtcacctgtaaga
gttccacctgtccctagagaatcctcatctcctgctgtcgtagataaagaggagcatgtt
caggaaccaatggatgctgatataaatgaacgatctggtgccacaaaagcagaactggag
agtataacagaagatggggagcttccaacgttgcttcctaacatgtctaagcttgaccat
tccacacaactgaacttaatttcaaaaagtatcattcctccactcaataaaatcaggtca
cagagtttcaaaaaacttgatgatagttctgatttcttgttggatattgaaagtgatctt
gatgagccagcacagattgaacaagaacatgaaaatatattatccagaaagtccgtgtca
tggatggattatgggctcagggaatttcgcctagttctttgcagaaaaatcactgctgat
gagagcaatgtgaatttagaagccaagatcaagatcagcatggaatatcctttaaggcct
cctctttttgcattgagtatttgctgtatatcctctggggaaaaccatgatgggacagga
ttagaatggtacaatgaacttcgtgcaatggaagcagaggtcaatctgcacataataagg
atgctacctgtcgatcaacaaaattatatattggctcatcaagtgagttgtctcgctatg
ttgttcgactattatttggatgaggcgtctccatcatctgaaaggacaaattgtacttcc
gtggttgatgttggcttatgcaagcctgttaatggtagattcctgggtagatcttttaga
ggacgggaccgcagaaagatgatatcctggaaagacatgaacttcaattctagccgtccc
taa
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