Cajanus cajan (pigeon pea): 109802147
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Entry
109802147 CDS
T04868
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109802147
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccaj03041
]
109802147
Spliceosome [BR:
ccaj03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
109802147
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
DUF6139
Motif
Other DBs
NCBI-GeneID:
109802147
NCBI-ProteinID:
XP_020218968
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Position
7:complement(1436376..1448747)
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AA seq
485 aa
AA seq
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MATLADSFLADLDELSDNEAEIPEDNDVDTADMEEDVDGDLADLENLNYDDLDSVSKLQK
TQRYSDIVQKVEEALKKDSDVLVQGVDLEDDPEYQLIVDCNALSVDIENEIVIIHNFIRD
KYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTTGKP
LPEEVLSKTIEACDRALDLDSAKKKVLDFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGL
SALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEIFQTTPPSLRMRACRILAAK
STLVARVDSIRGDPSGNTGRAFKDDILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRR
LRKMKERYAITDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSVGQSKLAA
KVAKKFKEKNYGSSGATSGLTSSLAFTPVQGIELTNPQAHAHQLGSGTQSTYFSETGTFS
KIKRT
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggctacgcttgctgattcatttctcgccgacctagatgaactctctgataacgaggct
gaaattccagaggacaacgatgtggatactgcagacatggaagaggatgttgatggcgac
ttggccgacttggaaaacctcaactatgatgacttggacagtgtttccaagttgcagaaa
acccagagatacagtgatattgttcagaaagtggaagaggcgcttaaaaaggattcagat
gtcttagttcagggagtggatttagaagatgatcctgaataccagctgattgtggattgc
aatgcactgtcagttgacattgagaatgaaattgttattattcataattttattcgtgac
aagtatcgcttgaaatttcctgagcttgagtcgttggtgcatcacccaatagattatgct
cgtgttgttaagaagataggaaatgaaatggatttgactcttgttgatttagaagggctt
ttaccttcggccattatcatggttgtctctgttaccgcatcaactacaactggcaagcca
cttccagaagaagtccttagtaagacaattgaggcctgtgatcgagctctggatcttgat
tcagcgaagaagaaagttcttgattttgttgagagtagaatgggctacattgcacctaat
ctttctgctattgttgggagtgctgttgcagctaaactcatggggacagctggtggtcta
tcagctcttgcaaagatgcctgcttgtaatgttcagcttcttggtgccaagaaaaagaat
cttgctgggttctccacggcaacatctcaatttcgtgtaggttaccttgagcaaacagaa
atatttcagactactcctccttctttgaggatgcgagcatgccgaatcctggctgctaag
tctacacttgtagcacgagtagattcaatacgtggggatccatctggaaacacgggaagg
gctttcaaggatgatatcctcaaaaaaattgagaagtggcaggagccccctcctgctaag
caaccaaaaccacttccagttcctgattctgagcctaaaaagaagagaggtggtcgtcgg
cttaggaagatgaaggaaaggtatgcaataacagacatgaggaagttagccaacaggatg
caatttggagtcccagaagagagttcattaggagatggtcttggggagggctatggaatg
cttggtcaggctggcagtggcaagcttcgtgtgtctgttggtcaaagcaaacttgctgca
aaagttgctaaaaaattcaaggaaaagaattacggtagtagtggtgctacatcgggtttg
acatctagtcttgcattcacaccagtgcagggtattgagctcacaaatccacaggctcat
gcacaccaacttggaagtggaactcaaagcacctacttctctgaaacaggaacattttca
aagatcaagaggacatga
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