Cajanus cajan (pigeon pea): 109802171
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Entry
109802171 CDS
T04868
Name
(RefSeq) SWI/SNF complex subunit SWI3B
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
109802171
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccaj03021
]
109802171
03036 Chromosome and associated proteins [BR:
ccaj03036
]
109802171
Transcription machinery [BR:
ccaj03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
109802171
Chromosome and associated proteins [BR:
ccaj03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
109802171
PBAF complex
109802171
GBAF(ncBAF) complex
109802171
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
SWIRM-assoc_1
Myb_DNA-bind_6
Myb_DNA-bind_7
ARM_FBXO47
CR_prot_dom_plant
Motif
Other DBs
NCBI-GeneID:
109802171
NCBI-ProteinID:
XP_020218996
LinkDB
All DBs
Position
7:complement(17444717..17448405)
Genome browser
AA seq
486 aa
AA seq
DB search
MATEASPSSAETPPLPPKPPPPPAPPAASAAKPEAPLSDSKASADANVIVVPSYSRWFSW
DSIHECEVRLLPEFFESASKTPRVYKYYRNSIVKYFRYNPTRKITFTDVRKTLVGDVGSI
RRVFDFLETWGLINYHPSSSLAKPLKWDDRETKPDSASNSTESSSAPAKETSKRLCSGCK
AVCTIACFACDKYDLTLCARCYVRGNYRVGVNSSDFRRVEISEETKTDWSEKEITNLLEA
ITHFGDDWKKVSQHVAGRTEKECVAHFLKLPFADQFLHYQQHPAGNGTDDGCNQLKRVTN
ADAESELDSVASAEPSKRMRLTPLADASNPIMAQAAFLSALAGPEVAQAAAQAALTTLSE
VYKATRISYRSFPRNALLQDAGITSNGGNTSDSFQGSRLHANIQLEKEELDVEKGISEII
KVQMKNIQDKLLHFEDLDLLMEKESQQLEQIKSMFFLDQLTLLFHKSSAPKSGECPEGNY
VKMNCD
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgaagcttccccttcctctgccgaaacgcctccgcttcctcccaagccaccg
ccgccgccggcaccaccggctgcgtctgctgcgaagccggaggcgccattgtccgattca
aaagcatccgcggacgcgaacgtaatcgtggtcccgagctactctcgatggttctcatgg
gattcgattcacgaatgcgaggtgcgtcttctcccggagttcttcgaatcggcgtcgaaa
acccctagggtttacaagtactacaggaattccatcgttaagtacttcagatacaatccc
acccgaaaaatcaccttcaccgatgtccgcaaaacgctcgtcggagacgtcggttccatc
cgcagagtcttcgatttcctcgaaacttggggtttgatcaattaccacccctcttcctcg
ctcgccaaacccttgaagtgggacgacagagagaccaagcccgattctgcttccaactcc
accgaatcttcttctgctcctgccaaagaaacctccaagagactctgcagtggctgcaaa
gctgtctgcaccattgcttgtttcgcttgtgacaagtatgatttgactctttgtgcgagg
tgttacgttcgcggcaattatagagtcggtgtgaattcatcggattttaggcgagtggag
ataagcgaggagacaaagacggattggtctgaaaaggagatcacgaatcttctggaagct
attacgcattttggtgatgactggaagaaggtttctcagcatgttgctggcagaactgag
aaggagtgtgttgctcattttttgaagcttccctttgcggatcaattcctgcattatcaa
caacaccctgccggcaatggcactgatgatggttgtaatcagttaaagagggtaactaat
gctgatgctgaatctgaattggatagcgttgcctctgctgaacctagtaagagaatgcgt
ctcacacctcttgctgatgctagcaatcctattatggctcaggctgctttcctgtctgcc
ttggcagggccagaagttgcacaagctgctgctcaagctgcattgacaactctgtctgag
gtttacaaagcaactagaataagttatcggtcatttccgaggaatgcattgctgcaagat
gccggtatcacatcaaacggtggtaatacttcagattcatttcaaggatcgcgattgcat
gcaaatatacagcttgagaaggaagagttagatgtggaaaaaggaatttccgagattata
aaagttcagatgaaaaatatccaagacaagcttcttcattttgaagatttagatcttctg
atggaaaaagaaagccagcagctggagcaaattaaaagcatgttttttcttgatcagctt
actcttttatttcataaatcatcggcaccaaaatccggagaatgcccagaaggcaattat
gtaaagatgaactgtgactga
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