Cajanus cajan (pigeon pea): 109802411
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Entry
109802411 CDS
T04868
Name
(RefSeq) vesicle transport v-SNARE 11 isoform X1
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
109802411
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccaj04131
]
109802411
Membrane trafficking [BR:
ccaj04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
109802411
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec20
RIFIN
Spectrin
Cauli_AT
Motif
Other DBs
NCBI-GeneID:
109802411
NCBI-ProteinID:
XP_020219365
LinkDB
All DBs
Position
7:complement(15468836..15472028)
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AA seq
220 aa
AA seq
DB search
MSGEFEGYERQYCQLSANLSKACIAAAPLDGEQKKQKISEIKEGIEEAEALIRKMDLEAR
SLQPDLKTLLLAKVREYKADLNIIKREVKKIVSGDLNPSVRDELLESNTTNVMMASADHR
ERLMVSTERLNKSGDRIKDSRRTMLETEEFGVSILQDLHSQRQSLLHTHDSLHGVDNNIS
RSKKILSNMSIRMNRNKCILSTIGVVLIVVIILILYFKLS
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgagtggggagtttgagggatatgagcggcagtattgccaactttcagctaatctatca
aaagcatgcatagcagctgctcctctcgatggagagcaaaagaaacaaaaaatttcagaa
ataaaggagggaattgaggaggcagaagctttgattcgaaaaatggaccttgaggcaaga
agtttacagccggaccttaagactctgcttcttgctaaggtgcgggagtacaaagcagat
ctgaacatcattaaaagagaagtgaagaaaattgtatctggtgacttaaacccttctgta
cgggatgagttgttggaatccaacacgacaaatgttatgatggcatcagctgatcataga
gaaagattaatggtatcaactgaaaggttgaacaagtctggtgacagaattaaggacagt
agaagaacaatgctggaaacagaagagtttggcgtttcgattcttcaagatttgcattca
cagagacaatctctactgcatacacatgattcgcttcatggagtggacaataacatcagc
aggagcaagaaaattttgtctaacatgtcaataaggatgaacaggaacaagtgcatcttg
agcaccattggtgtggtcctgattgttgttatcatcttgattctatacttcaaactttca
taa
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