Cajanus cajan (pigeon pea): 109802427
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Entry
109802427 CDS
T04868
Name
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37c
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03040
Spliceosome
ccaj04141
Protein processing in endoplasmic reticulum
ccaj04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109802427
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109802427
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109802427
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccaj01009
]
109802427
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccaj03041
]
109802427
03009 Ribosome biogenesis [BR:
ccaj03009
]
109802427
03110 Chaperones and folding catalysts [BR:
ccaj03110
]
109802427
04131 Membrane trafficking [BR:
ccaj04131
]
109802427
03051 Proteasome [BR:
ccaj03051
]
109802427
03029 Mitochondrial biogenesis [BR:
ccaj03029
]
109802427
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccaj04147
]
109802427
Protein phosphatases and associated proteins [BR:
ccaj01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
109802427
Spliceosome [BR:
ccaj03041
]
Complex B
Other components
Prp19 complex
109802427
Complex C
Prp19-CDC5 complex
109802427
Ribosome biogenesis [BR:
ccaj03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
109802427
Chaperones and folding catalysts [BR:
ccaj03110
]
Heat shock proteins
HSP70 / DNAK
109802427
Membrane trafficking [BR:
ccaj04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
109802427
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
109802427
Proteasome [BR:
ccaj03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
109802427
Mitochondrial biogenesis [BR:
ccaj03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
109802427
Exosome [BR:
ccaj04147
]
Exosomal proteins
Proteins found in most exosomes
109802427
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
DDR
FGGY_C
ParM_N
STIV_penton_2nd
Motif
Other DBs
NCBI-GeneID:
109802427
NCBI-ProteinID:
XP_020219388
LinkDB
All DBs
Position
7:complement(18180239..18182361)
Genome browser
AA seq
602 aa
AA seq
DB search
MAKDEGIAIGIDLGTTYSCVAVWQQQHNRVEIMNNEQGNRTTPSVVAFTDNQRLIGDAAK
NQVVNNPNNTIFDAKRLIGRKYSDDIVQKDKMLWPFKVVAGTDDKPMIVVNYKGEEKQLC
AEEVSSMVLVKMREIAEAYLEKPVKNAVVTVPAYFNDSQRKATIDAGTIAGLNVMRIINE
PTAAAVAFGMDKITYCVAERNVFIFDLGGGTLDVSLLTIKGKVFQVKATAGNTHLGGEDF
DNRMVNYFVEEIKRKNKVDISRNLRALRRLRTACERAKRTLSYGVTTTIEVDALVQGIDF
SSSITRARFDTLNTELFEECMKIVEKCLSDANMDKSSVDNVVLVGGSSRIPKVQQLLQNF
FNGKDLCKSINPDEAVACGAAVHAALLSEGIKNVPDFVLLDVTPLSLGISANVDKIMSVV
IPRNTSIPVKKTRVYCTPVNHASYVTIRVYEGERTRVSDNNFLGSFNLCGLPAPRYHPFD
VCFAIDANGILSVSAEERTTGNKNQITITNDQGRLSAKEIKRIIHEAEKYEAEDKKANIM
NALEDYVYLINNALKGHISSAITRATNLLEGNNQEDDIVVLEDCMKELKSIFEKVKPIDK
IG
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatgagggaattgccataggaatcgaccttggcacaacctactcgtgtgtt
gcagtgtggcagcagcaacataatagagtagaaataatgaacaacgaacaaggtaacaga
accacaccttctgttgtcgctttcacagacaatcagaggttgattggtgatgctgctaag
aatcaggttgtcaacaacccaaataacactatttttgatgctaagaggttgattggtagg
aaatatagtgatgacattgttcaaaaagataaaatgttgtggccattcaaggtagttgct
ggtactgatgataaacctatgatcgtagttaattacaagggtgaggagaaacagctttgt
gccgaggaagtatcatccatggtccttgtgaagatgcgggagattgcagaagcgtatttg
gaaaaacctgtgaagaatgcagttgttactgtgcctgcttatttcaatgactctcagcgt
aaagcaactattgatgctggaaccatcgctggcctcaatgttatgcggataatcaatgaa
cctaccgctgcagctgttgcatttggcatggacaagataacttattgtgttgcagagcga
aacgttttcatctttgacctcggtggtggtactttggatgtgtctctcctcacaattaag
ggtaaggtgttccaagttaaggccactgctggaaacactcatcttgggggagaggacttt
gacaacagaatggtgaattactttgtagaggagatcaaaaggaagaacaaagtggacatt
agtagaaacctaagagccctaaggagattgagaactgcgtgtgaaagggcgaaaaggaca
ctctcgtatggagtgactaccaccattgaggtagatgctttggttcagggcattgacttc
tcttcttcaatcactcgagcaagatttgacacactgaatacggagctctttgaagagtgt
atgaagatagtagaaaagtgtcttagtgatgctaatatggacaagagcagtgtagataat
gttgttcttgttggtggctcttctaggattcccaaagttcagcagctattgcagaacttt
ttcaatgggaaggatttgtgcaagagcatcaaccctgatgaagctgttgcttgtggtgca
gctgtacatgctgctttgttgagtgaaggcattaagaatgttccagattttgtgctattg
gatgttacaccactgtcccttggtatatccgcaaatgtagataaaatcatgagtgtggtg
attcctaggaacactagcattcctgtaaagaagacacgggtatactgcacaccagtaaat
catgcatcatatgtcacgattagagtttatgagggtgagagaacaagagtcagtgataac
aattttcttggttcctttaatctttgtggccttccagctcctcgttaccatccttttgat
gtgtgctttgctatagatgcaaatggtatcttatctgtttctgctgaggaaagaaccact
ggcaataagaaccagattaccataaccaatgatcaaggaagactatcagcaaaagaaatc
aagagaattatccatgaagcagagaaatacgaggctgaagataagaaggccaacataatg
aacgctttggaagattatgtttacttgatcaataatgctttgaagggccatatcagttct
gcaattactagggccacaaatttgcttgagggtaataaccaagaggatgatatagttgtg
ttagaggattgtatgaaagagcttaagagcatctttgaaaaggtcaagcccattgacaag
attggttag
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integrated database retrieval system
