Cajanus cajan (pigeon pea): 109802428
Help
Entry
109802428 CDS
T04868
Name
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37c
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03040
Spliceosome
ccaj04141
Protein processing in endoplasmic reticulum
ccaj04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109802428
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109802428
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109802428
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccaj01009
]
109802428
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccaj03041
]
109802428
03009 Ribosome biogenesis [BR:
ccaj03009
]
109802428
03110 Chaperones and folding catalysts [BR:
ccaj03110
]
109802428
04131 Membrane trafficking [BR:
ccaj04131
]
109802428
03051 Proteasome [BR:
ccaj03051
]
109802428
03029 Mitochondrial biogenesis [BR:
ccaj03029
]
109802428
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccaj04147
]
109802428
Protein phosphatases and associated proteins [BR:
ccaj01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
109802428
Spliceosome [BR:
ccaj03041
]
Complex B
Other components
Prp19 complex
109802428
Complex C
Prp19-CDC5 complex
109802428
Ribosome biogenesis [BR:
ccaj03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
109802428
Chaperones and folding catalysts [BR:
ccaj03110
]
Heat shock proteins
HSP70 / DNAK
109802428
Membrane trafficking [BR:
ccaj04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
109802428
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
109802428
Proteasome [BR:
ccaj03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
109802428
Mitochondrial biogenesis [BR:
ccaj03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
109802428
Exosome [BR:
ccaj04147
]
Exosomal proteins
Proteins found in most exosomes
109802428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
Hydantoinase_A
FGGY_C
DDR
ParM_N
Motif
Other DBs
NCBI-GeneID:
109802428
NCBI-ProteinID:
XP_020219389
LinkDB
All DBs
Position
7:18144907..18147698
Genome browser
AA seq
529 aa
AA seq
DB search
MLWPFKVVAGTNDKPMIVVKYKGQEKQLCAEEVSSMVLVKMREIAEAFLEKPVKNAVVTV
PAYFNDSQRKATMDAGAIAGLNVIRIISEPTAAAIAYGLDKRTNCVGERNIFIFDLGGGT
FDVSLLTIKDKVFQVKATAGNTHLGGEDIDNRMVNYFVEEIKRKNKVDISGNPRALRRLR
TACERAKRTLSCVVTTKVDVDAIFQGIDFNSSINRARFEEINMELFEECIETVEKCLTDA
KMDKSSVHDVVLVGGSSRIPKVQQLLQAFFNGKDLCKSINPDEAVAYGAAVQAALLSKGF
KNVPDLVLLDVTPLSLGISITGDRMSVVVPRNTSIPLKKKQGFGTSFDNQSSVGIDVYEG
ERTRASDNNLLGFFVLSSFPPAPRGHPLDVSFSIDENGILSVSAEEKTTGNRNEITIIND
KDRMSAKEIERMIQEAKFYEAEDREFLKKANTKNDLDKCVYKIRNALKKDCIRSLVCSKE
KEDICSAINRAADLLDEENEQYDIAVFEACLKELESFLERLESLGIIVK
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgttgtggccatttaaggtcgttgctggtaccaatgacaaaccaatgatcgtggttaaa
tacaagggtcaggagaagcaactttgtgctgaggaagtatcatccatggtccttgttaag
atgcgggagattgctgaggcttttttggaaaaacctgtgaagaatgctgttgttactgtg
cctgcttatttcaatgactctcagcgtaaagccaccatggatgctggtgccattgctggc
ctcaatgttatacggataatcagtgaacccactgctgctgctattgcatatggccttgac
aagagaactaattgtgttggagagcgaaacattttcatctttgacttaggtggtggtact
tttgatgtgtcactcctcacaatcaaggataaggtcttccaggttaaggccactgctgga
aacactcatcttggaggagaggacatcgacaacagaatggtgaactattttgtagaagag
atcaaaaggaaaaacaaagtggacattagtggcaatcctagggctctaaggaggttgaga
actgcatgtgagagggcaaaaaggacactctcttgtgttgttaccaccaaagttgatgtt
gatgctatatttcaaggcatagacttcaactcttcaatcaatcgtgcaaggtttgaggaa
attaatatggagctgtttgaagagtgcattgagacagtagagaagtgtcttactgatgct
aagatggacaaaagcagtgtgcatgatgttgtccttgttggtggctcttctagaattccc
aaagtgcagcagttattgcaggctttcttcaatggtaaagatttgtgcaagagtattaac
cctgatgaggctgttgcttatggcgcagctgtgcaagctgcattgttgagtaaaggcttt
aagaatgttccagatttggtattattagatgtcacaccgctgtctctcggtatatcgatc
acaggagatcgtatgagtgttgtggttcctaggaacacttccattcctctaaagaagaaa
caaggatttggaacatcctttgataaccaatcttcggtcgggattgatgtttatgagggt
gagagaacaagagccagtgataacaatttgctggggttttttgttctttctagttttcct
cccgctcctcgtgggcatcctttagatgtgagcttttcaattgatgaaaatggtatatta
tctgtttctgctgaggaaaagaccactggcaataggaacgaaattactatcatcaatgat
aaagacagaatgtcggccaaagaaattgaaagaatgatacaagaagcaaagttttatgag
gccgaagatagagagttccttaagaaagccaatactaagaatgatttggataagtgtgta
tacaaaatcaggaatgccttgaagaaggattgtatcaggtcattggtttgctctaaagaa
aaggaggacatatgttctgcaataaatagggctgctgatttgcttgatgaggagaatgaa
cagtatgacattgctgtgtttgaggcttgtctgaaagagcttgagagcttccttgaaaga
ctcgagtccttgggaatcattgttaagtaa
DBGET
integrated database retrieval system
