Cajanus cajan (pigeon pea): 109802443
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Entry
109802443 CDS
T04868
Name
(RefSeq) transcription elongation factor SPT4 homolog 1
KO
K15171
transcription elongation factor SPT4
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
109802443
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccaj03021
]
109802443
03019 Messenger RNA biogenesis [BR:
ccaj03019
]
109802443
Transcription machinery [BR:
ccaj03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
109802443
RNA polymerase I system
109802443
Messenger RNA biogenesis [BR:
ccaj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
109802443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt4
VWC2L_2nd
HIPIP
Motif
Other DBs
NCBI-GeneID:
109802443
NCBI-ProteinID:
XP_020219406
LinkDB
All DBs
Position
7:11098200..11103682
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AA seq
116 aa
AA seq
DB search
MANAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCQFFKMEEDHERVVDCTTPNFN
GIISVMDPTRSWAARWLRIGKFVPGVYTLAVSEALPEEMQTICEDERVQYIPPKRL
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatgcacctgcacaaattcctacaagttttggccatgagttgagggcttgtctt
cgttgccgccttgtcaaaacctatgatcagttcagagagtcgggctgtgagaattgccaa
ttctttaagatggaagaagatcacgagcgtgttgttgattgcactactcccaattttaat
gggatcatttcagttatggatccaactcgtagttgggctgcccgttggttgcgcattggt
aagtttgttcctggtgtatatactcttgctgtctcggaggctcttccagaagagatgcag
accatatgtgaagacgaacgtgtgcaatatatccctcccaagcgtttgtga
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