Cajanus cajan (pigeon pea): 109802797
Help
Entry
109802797 CDS
T04868
Name
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37c
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03040
Spliceosome
ccaj04141
Protein processing in endoplasmic reticulum
ccaj04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109802797
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109802797
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109802797
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccaj01009
]
109802797
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccaj03041
]
109802797
03009 Ribosome biogenesis [BR:
ccaj03009
]
109802797
03110 Chaperones and folding catalysts [BR:
ccaj03110
]
109802797
04131 Membrane trafficking [BR:
ccaj04131
]
109802797
03051 Proteasome [BR:
ccaj03051
]
109802797
03029 Mitochondrial biogenesis [BR:
ccaj03029
]
109802797
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccaj04147
]
109802797
Protein phosphatases and associated proteins [BR:
ccaj01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
109802797
Spliceosome [BR:
ccaj03041
]
Complex B
Other components
Prp19 complex
109802797
Complex C
Prp19-CDC5 complex
109802797
Ribosome biogenesis [BR:
ccaj03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
109802797
Chaperones and folding catalysts [BR:
ccaj03110
]
Heat shock proteins
HSP70 / DNAK
109802797
Membrane trafficking [BR:
ccaj04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
109802797
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
109802797
Proteasome [BR:
ccaj03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
109802797
Mitochondrial biogenesis [BR:
ccaj03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
109802797
Exosome [BR:
ccaj04147
]
Exosomal proteins
Proteins found in most exosomes
109802797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
Hydantoinase_A
FGGY_C
DDR
ParM_N
Motif
Other DBs
NCBI-GeneID:
109802797
NCBI-ProteinID:
XP_020219781
LinkDB
All DBs
Position
7:18236162..18239784
Genome browser
AA seq
643 aa
AA seq
DB search
MLWPFKVVAGTNDKPMIVVKYKGQEKQLCAEEVSSMVLVKMREIAEAFLEKPVKNAVVTV
PAYFNDSQRKATMDAGAIAGLNVIRIISEPTAAAIAYGLDKRTNCVGERNIFIFDLGGGT
FDVSLLTIKDKVFQVKATAGNTHLGGEDIDNRMVNYFVEEIKRKNKVDISGNPRALRRLR
TACERAKRTLSCVVTTKVDVDAIFQGIDFNSSINRARFEEINMELFEECIETVEKCLTDA
KMDKSSVHDVVLVGGSSRIPKVQQLLQAFFNGKDLCKSINPDEAVAYGAAVQAALLSKEM
DAKRLIGRKYSEQNVQKDKMLWPFKVVAGTNDKPMIVVKYKGQEKQLCAEEVSSMVLVKM
REIAEAFLEKPVKNAVVTVPAYFNDSQRKATMDAGAIAGLNVIRIISEPTAAAIAYGLDK
RTNCVGERNIFIFDLGGGTFDVSLLTIKDKVFQVKATAGNTHLGGEDIDNRMVNYFVEEI
KRKNKVDISGNPRALRRLRTACERAKRTLSCVVTTKVDVDAIFQGIDFNSSINRARFEEI
NMELFEECIETVEKCLTDAKMDKSSVHDVVLVGGSSRIPKVQQLLQAFFNGKDLCKSINP
DEAVAYGAAVQAALLSKGFKNVPDFSITMILKGSIIEHKNRLL
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgttgtggccatttaaggtcgttgctggtaccaatgacaaaccaatgatcgtggttaaa
tacaagggtcaggagaagcaactttgtgctgaggaagtatcatccatggtccttgttaag
atgcgggagattgctgaggcttttttggaaaaacctgtgaagaatgctgttgttactgtg
cctgcttatttcaatgactctcagcgtaaagccaccatggatgctggtgccattgctggc
ctcaatgttatacggataatcagtgaacccactgctgctgctattgcatatggccttgac
aagagaactaattgtgttggagagcgaaacattttcatctttgacttaggtggtggtact
tttgatgtgtcactcctcacaatcaaggataaggtcttccaggttaaggccactgctgga
aacactcatcttggaggagaggacatcgacaacagaatggtgaactattttgtagaagag
atcaaaaggaaaaacaaagtggacattagtggcaatcctagggctctaaggaggttgaga
actgcatgtgagagggcaaaaaggacactctcttgtgttgttaccaccaaagttgatgtt
gatgctatatttcaaggcatagacttcaactcttcaatcaatcgtgcaaggtttgaggaa
attaatatggagctgtttgaagagtgcattgagacagtagagaagtgtcttactgatgct
aagatggacaaaagcagtgtgcatgatgttgtccttgttggtggctcttctagaattccc
aaagtgcagcagttattgcaggctttcttcaatggtaaagatttgtgcaagagtattaac
cctgatgaggctgttgcttatggcgcagctgtgcaagctgcattgttgagtaaagaaatg
gatgccaagaggttgattggtaggaaatatagcgagcaaaatgttcaaaaagataaaatg
ttgtggccatttaaggtcgttgctggtaccaatgacaaaccaatgatcgtggttaaatac
aagggtcaggagaagcaactttgtgctgaggaagtatcatccatggtccttgttaagatg
cgggagattgctgaggcttttttggaaaaacctgtgaagaatgctgttgttactgtgcct
gcttatttcaatgactctcagcgtaaagccaccatggatgctggtgccattgctggcctc
aatgttatacggataatcagtgaacccactgctgctgctattgcatatggccttgacaag
agaactaattgtgttggagagcgaaacattttcatctttgacttaggtggtggtactttt
gatgtgtcactcctcacaatcaaggataaggtcttccaggttaaggccactgctggaaac
actcatcttggaggagaggacatcgacaacagaatggtgaactattttgtagaagagatc
aaaaggaaaaacaaagtggacattagtggcaatcctagggctctaaggaggttgagaact
gcatgtgagagggcaaaaaggacactctcttgtgttgttaccaccaaagttgatgttgat
gctatatttcaaggcatagacttcaactcttcaatcaatcgtgcaaggtttgaggaaatt
aatatggagctgtttgaagagtgcattgagacagtagagaagtgtcttactgatgctaag
atggacaaaagcagtgtgcatgatgttgtccttgttggtggctcttctagaattcccaaa
gtgcagcagttattgcaggctttcttcaatggtaaagatttgtgcaagagtattaaccct
gatgaggctgttgcttatggcgcagctgtgcaagctgcattgttgagtaaaggctttaag
aatgttccagatttcagtattactatgatcctgaaggggagtattatcgaacacaaaaac
aggcttctgtga
DBGET
integrated database retrieval system
