Cajanus cajan (pigeon pea): 109802799
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Entry
109802799 CDS
T04868
Name
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37c
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03040
Spliceosome
ccaj04141
Protein processing in endoplasmic reticulum
ccaj04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109802799
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109802799
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
109802799
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccaj01009
]
109802799
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccaj03041
]
109802799
03009 Ribosome biogenesis [BR:
ccaj03009
]
109802799
03110 Chaperones and folding catalysts [BR:
ccaj03110
]
109802799
04131 Membrane trafficking [BR:
ccaj04131
]
109802799
03051 Proteasome [BR:
ccaj03051
]
109802799
03029 Mitochondrial biogenesis [BR:
ccaj03029
]
109802799
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccaj04147
]
109802799
Protein phosphatases and associated proteins [BR:
ccaj01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
109802799
Spliceosome [BR:
ccaj03041
]
Complex B
Other components
Prp19 complex
109802799
Complex C
Prp19-CDC5 complex
109802799
Ribosome biogenesis [BR:
ccaj03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
109802799
Chaperones and folding catalysts [BR:
ccaj03110
]
Heat shock proteins
HSP70 / DNAK
109802799
Membrane trafficking [BR:
ccaj04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
109802799
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
109802799
Proteasome [BR:
ccaj03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
109802799
Mitochondrial biogenesis [BR:
ccaj03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
109802799
Exosome [BR:
ccaj04147
]
Exosomal proteins
Proteins found in most exosomes
109802799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
DDR
Hydantoinase_A
Motif
Other DBs
NCBI-GeneID:
109802799
NCBI-ProteinID:
XP_020219783
LinkDB
All DBs
Position
7:complement(18289738..18291644)
Genome browser
AA seq
546 aa
AA seq
DB search
MAKDHGFVIGIDLGTTYSCVAVWKEQHCRVEIIHNDQGNNTTPSCVAFTTHERLIGDSAK
NQAATNPENTIFDAKRLIGRRYSDHVVQKDILLWSFKVIAGTNDKPMIVINYKNQEKYLS
AEEVSSMILTKMREIAENYLESPVKNAVVTVPAYFNNSQRKATIDAGAIAGLNVVRIINE
PTAAAIAYGLDKRTNCVGERNIFIFDFGGGTFDVSLLTIKDKVFQVKATAGNTHLGGEDI
DNRMVNYFVEEMKRKNKVDISGNPRALRRLRTACERAKRTLSYAVTTNIEVDAIFQGIDL
CSSITRAKFEEINMKLFEECMNTVERCLSDAKMDKSSVHDVVLVGGSSRIPKVQQLLQDY
FKGKDLCKSINPDEAVAYGAAVQAALLSEGIKNVPNLVLLDVTPLSLGKDIVGDIMSVVI
PRNTTIPVKRTKEYMTIEDNQPSTRIKVYEGERTRASDNNLLGSFVLSGFPRVPRGHAFC
VTFALDENSILSVSAEDKTTGSKNEIIITNDRERLSTVEINRMIQEAEYYKAEDEKFLRK
AKTMND
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagatcatggatttgtcattggaatcgaccttggcacaacttactcgtgtgtt
gcagtatggaaggaacagcactgtcgagtggagatcatccacaatgatcaaggcaacaac
accactccttcttgtgttgctttcacgactcatgaaagattgattggtgattctgctaaa
aatcaggctgccaccaatccagagaacaccatcttcgatgccaagaggttaattggtagg
agatatagtgatcatgttgttcaaaaagatatattgttgtggtcattcaaggtcattgct
ggtactaatgacaaacccatgatcgtcattaactacaagaatcaagagaaatacctttcg
gctgaggaagtatcatctatgatcctcacaaagatgagggagattgctgagaactatttg
gagtcaccggttaagaatgctgttgttactgtgcctgcatatttcaataactctcagcgt
aaagccaccatagatgctggtgccattgccggtctcaatgttgtccgaataatcaatgaa
cctaccgctgcagctattgcatatggccttgacaagagaactaattgtgttggagagcga
aacattttcatatttgactttggcggtggtacttttgacgtgtctctactcacaattaag
gataaggtgttccaagttaaggccactgctggaaacactcacctcgggggagaggacatt
gataacagaatggtgaattactttgtagaagagatgaaaaggaaaaacaaagtggacatt
agtggcaacccaagagccctaaggaggttgagaactgcatgtgagagggcaaaaaggaca
ctctcgtatgctgttactaccaacattgaggtggatgctatatttcaaggcattgacttg
tgttcttccatcactcgtgcaaagtttgaggaaatcaatatgaagctgtttgaagagtgt
atgaatactgtagaaaggtgtcttagtgatgctaagatggacaaaagcagtgtgcatgat
gttgtgcttgttggtggttcttctaggattcccaaagtgcaacaactattgcaagactac
ttcaaagggaaggatctttgcaagagtatcaaccctgacgaggctgttgcttatggtgca
gctgtgcaggctgctttgttgagtgaaggcattaagaatgttccaaacttggttctgttg
gatgttacaccactctcactcggtaaggatatagttggagatatcatgagtgttgtgatt
cctaggaatactactattcctgtaaagaggacaaaagaatacatgacaattgaagataac
caaccctcgacccggattaaagtttatgagggtgagagaactagagccagtgataataat
ttgttgggttcttttgttctttctggatttcctcgggttcctcgtggccatgctttttgt
gtgacttttgcattagatgaaaatagcatcctttctgtttctgctgaggataaaacaact
ggtagcaagaatgagattatcataaccaatgacagagaaagactgtcaacggtagaaatt
aatagaatgattcaagaagccgaatattacaaggctgaagatgaaaagttcctgaggaag
gccaaaacaatgaatgattaa
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