Cajanus cajan (pigeon pea): 109803430
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Entry
109803430 CDS
T04868
Name
(RefSeq) nuclear poly(A) polymerase 1 isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109803430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccaj03019
]
109803430
Enzymes [BR:
ccaj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
109803430
Messenger RNA biogenesis [BR:
ccaj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
109803430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Motif
Other DBs
NCBI-GeneID:
109803430
NCBI-ProteinID:
XP_020220593
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All DBs
Position
8:1890127..1899569
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AA seq
752 aa
AA seq
DB search
MGSPGLSNRNNGQQQWLGITEPITLGGPTDYDVIKTRELEKYLQDAGLYENQQEAVRREE
VLGRLDQIVKIWVKTISRAKGLNQQLVQEANAKIFTSGSYRLGVHGPGADIDTLCVGPRH
ASRDEDFFGELHKMLSEMPEVTELHPVPDAHVPVMKFMFNGVSIDLLYAKLSLWVIPEDL
DISQESILQNADEQTVRSLNGCRVTDQVLRLVPNIQNFRTTLRCMRFWAKRRGIYSNVTG
FLGGINWALLVARICQLFPNALPNMLVSRFFRVYTQWHWPNPVMLCAIEEGSFGLQVWDP
RRYPKDRFHLMPIITPAYPCMNSSYNVSSSTLRIMTEEFQRGNEICQAMEANKADWDNLF
EPCSFFEAYKNYLQIDISAENAEDLRKWKGWVVSRLRQLTLKIERHTYGMLQCHPHPGDF
SDKSRSFHCSYFMGLQRKQGVPVSDGKQFDIRPTVEEFKHSVNMYTLWKPGMDIHVSHVK
RRSIPNFVFPGGVRPSSLSKVTWESKQSSESSVSGHGQAEKSQEGKVVVLGANDDRKRKQ
AEDSVDSLRNSKSLTSLPPSSRDVHEDGNPISTASSCSVRCNDSEINSMSELQSEKPDLK
SSGECPGDIETNESVRTNLQVNATLTAMDTSSSKEAEKLAIEKIMCSPYDAQQAFSEEPD
ELEDEILDYRNQVKDLGGNMKNSNLDSSNSETAVAGEPIIPKRETTSATRLYSNWGSEEL
ELAEPTAPPVPQRKPLIRLNFTSLGKATDKSS
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atggggagcccgggattgagcaaccgcaataatgggcagcagcaatggttgggcataaca
gaacccatcacattgggtggacccacagattatgatgtgatcaagacacgtgaacttgag
aagtatttgcaagatgctggcttatatgagaatcagcaggaggcagttcgtagggaggaa
gtgcttggcaggctagaccagattgtgaagatttgggtcaaaaccattagccgtgcaaag
ggacttaaccagcaactggtgcaagaagcaaatgccaagatttttacttctggctcctat
cgactaggggtacatggccctggagcagatatagacactctttgtgtggggccaagacat
gcatccagagatgaggatttctttggtgagctacataagatgctatccgagatgccagaa
gtaacagagttgcaccctgtgcctgatgctcatgtaccagtaatgaagttcatgttcaac
ggtgtttctatagatctcctttatgcaaaattatctttgtgggttattcctgaagacttg
gatatatcccaggagtcaatattacaaaatgcagatgagcaaactgtccgtagtcttaat
ggttgtagagtgactgatcaagtcctgcgtttggttccaaatattcagaattttcgtaca
acattgaggtgcatgaggttttgggcaaagcgtcgtggaatttattcaaatgttacaggt
tttcttggtggtataaactgggcgttgcttgttgctcgaatatgccagctatttcccaat
gcactgcctaatatgttagtgtctcgattcttcagggtatatactcagtggcattggcca
aatccagtaatgctttgtgctatagaagagggatcatttggacttcaagtttgggatccc
agaagatatcccaaggatagattccacctaatgccgataataactcctgcttatccttgc
atgaattctagctacaatgtgtcatcaagtacattgcgtattatgacggaggagtttcag
aggggaaatgaaatatgtcaggctatggaagctaacaaagctgattgggacaatcttttt
gagccttgttccttttttgaagcttataagaattatttacagatagacatatcagcagag
aatgctgaagaccttagaaaatggaaaggctgggttgtgtctcgcctgcgccagttgaca
ttgaaaattgagaggcacacttatggcatgcttcagtgtcatccacatcctggtgacttt
tcagacaaatccagatctttccactgctcctacttcatgggactgcaacgtaagcaagga
gttcctgtcagtgatggtaaacagttcgatataagaccaactgttgaagaatttaagcat
tctgttaatatgtacactctatggaaacctggaatggatatccatgtttcccatgtgaaa
cgtcgtagtatacctaactttgtatttcctggtggtgttcgaccttccagcctatctaaa
gtaacttgggagagtaagcaaagttcagaatcaagtgtttctggccatggtcaagcagaa
aagtctcaagaaggtaaagtggttgtattaggagcaaatgatgataggaagagaaaacaa
gcagaagatagtgtagatagcttgagaaattcgaagtcccttacatctttgcctccctcc
agcagggacgttcatgaagatggaaatcctattagcactgctagttcttgctctgtgaga
tgtaatgactcagaaatcaatagtatgagtgaactacagagtgaaaaacctgatttgaaa
tcttcaggggagtgtcctggggatatagagaccaatgaatcagtgagaaccaacttacaa
gttaatgcaacacttactgccatggatacatctagttctaaagaagctgaaaaactagcc
attgagaagattatgtgtagtccatatgatgcacaacaagccttttcagaagaacctgat
gagcttgaagatgaaattcttgattacagaaatcaagtgaaagatttaggcgggaacatg
aaaaacagcaacttggactcctcaaactcagagactgcagtggctggcgaaccaattatt
cccaagcgggagaccacttctgctactcgtttatactcaaattggggctcggaagagctt
gagctggcggagccgacagcaccacctgtgccacagcggaagccccttatcaggttgaac
ttcacctccttagggaaagctactgacaaaagttcttag
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