KEGG   Cajanus cajan (pigeon pea): 109803462
Entry
109803462         CDS       T04868                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog isoform X1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
ccaj  Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:ccaj00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ccaj04812]
    109803462
Cytoskeleton proteins [BR:ccaj04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     109803462
SSDB
Motif
Pfam: Katanin_con80 WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd EIF3I WDR55 WD40_MABP1-WDR62_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_SCAP WD40_MABP1-WDR62_2nd Beta-prop_EML ANAPC4_WD40 Beta-prop_SPT8 Beta-prop_TEP1_C NBCH_WD40 Beta-prop_DCAF4 Beta-prop_WDR75_1st Beta-prop_EIPR1 eIF2A Beta-prop_IFT140_1st WD40_RFWD3 Beta-prop_IFT122_1st Beta-prop_Vps41 WDR90_beta-prop_4th Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_IP5PC_F Beta-prop_DCAF12 Beta-prop_VPS8 Beta-prop_WDR75_2nd PROPPIN WD_LRWD1
Other DBs
NCBI-GeneID: 109803462
NCBI-ProteinID: XP_020220636
LinkDB
Position
8:complement(18407325..18417730)
AA seq 825 aa
MAKRGYKIQEFVAHSASVNCLNIGKKACRLFVTGGDDHKVNLWTIGKPTSLMSLSGHTSP
VESVAFDSGEVLVLGGASSGVIKLWDLEEAKMVRTVAGHRSNCTAVEFHPFGEFLASGSM
DTNLKIWDIRKKGCIHTYKGHSQGISTIKFTPDGRWVVSGGFDNVVKVWDLTAGKLLHDF
KFHEGHIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGSARREATGVRSIVFHPDGRT
LFTGHEDGLKVYSWEPVICHDTVDMGWTTLGDLCIHDGKLLGCSFYRNSVGVWVADISLI
EPYGAGLDPKKNEGTEKNLSLQKSKLEKVEVNVGPTSGLRSMSPDESKEIKNIYIDSSGG
KPVTLQRSGSLSSTKVDLPEEFKEICNLGTAKQSPATGVRVKSNEQAIRKSFIAPNIVPR
DIPDSKVSAKSEKETITFSKTKPGMLLRPAHVRRASTGRFDVDRFPEDVNSGTFCDTATK
LDSTKEPKVQTNLGSLNEVKESCEDKHPIKSVTDKFDKTVSPSRFSDQRKCDESSPCNEG
ISPVKYVNGVAVVRGRTRSLVERFERREKIQIDEDQTNVFLPTINETREKVHNEDQIEAS
PTPTMVFERRERIPFNEDRNNLPSVPKSISETDKSPNILKVEPQIPKEDSNSANEEEIIE
GLMQTHDITLSNLRSRLTKLQVVQHFWERNDIKGATNALKKLPDQSVQADVISVLVEKME
IFTMDLFSCLLPVLTGLLDGKIERHVKVSLDMLLKLVAVFGPTIRATVSAPPSVGVDLHQ
EERRECCNQCFMELQKIQMILPILIRRGGLLAKSALELNLVLQQS
NT seq 2478 nt   +upstreamnt  +downstreamnt
atggcaaagcgtggatataaaatacaggaatttgtggctcattcagcaagcgtcaattgt
ttaaatattggaaagaaggcgtgccgtcttttcgttacagggggggatgatcacaaggtc
aatctatggacaatcggcaaaccaacttctttaatgagcctgtctggtcatactagtcca
gttgaatctgtcgcatttgactcaggagaagtgttggttcttggcggagcatcatcaggt
gtgatcaagctttgggatttggaagaagcaaagatggttcgcactgttgctggacacaga
tccaattgtactgctgttgagtttcatcctttcggtgaatttttggcatctggctccatg
gacactaatctaaagatttgggacatcagaaaaaaaggatgtattcatacgtataagggt
catagccagggaatcagcactatcaaattcactcctgatggccgctgggttgtttctggt
ggatttgataatgttgtgaaggtgtgggatctaactgctgggaagctcttgcatgacttc
aagttccatgaaggacacattaggtcattggatttccatccgcttgagtttcttctggct
acaggttctgctgatagaacagtgaaattctgggatttagaaacctttgagctgattgga
tctgccagacgtgaggcaactggggtacgatctatagtttttcatcctgatggaaggacc
ctatttactggacatgaagatggtttgaaggtgtattcatgggaacctgttatatgtcat
gatactgttgatatgggatggacaacacttggtgatctttgtattcacgatgggaaactt
ttggggtgctcattctaccgaaattctgttggagtctgggtagcagatatatcgcttatt
gagccatatggtgctggcttggatcccaagaaaaatgaaggcacagaaaagaatcttagt
cttcagaaaagtaaactggagaaagtagaagttaatgtaggaccaacctctgggttgcgt
agcatgtctcctgatgagtctaaagagataaagaatatatatatcgactcttctggcggg
aaacctgttactttacagagatcagggtctttaagttcaacaaaagtagatcttccagag
gaattcaaggaaatttgcaacttgggaacagcgaagcagagtcctgcaacaggagttcgt
gtaaaatcaaatgaacaagcaattagaaaatctttcattgcgcctaacattgtacctcgg
gacattcctgacagtaaggtctcagcaaaatctgaaaaagagaccatcaccttttcaaag
acaaaacctggaatgttacttagaccagctcatgtacggagagcatccactggcagattt
gatgttgataggtttccagaagatgtgaattctggaactttttgtgatactgcaactaaa
ttagacagcacaaaagaacccaaagtgcaaacgaatctaggatctctgaatgaagtcaaa
gaatcttgtgaagataaacatcctatcaagagtgttacagacaagtttgacaagactgta
tctccaagcagattttctgaccaaagaaaatgtgatgaatcctcaccttgcaatgaaggg
attagtcctgttaaatatgtcaatggagttgctgttgtacgaggaaggacacggtcattg
gttgaaaggtttgaaagaagggaaaagattcaaattgatgaagatcaaactaatgtattc
cttcccacaataaatgaaacaagagaaaaagttcacaatgaagatcaaatcgaagcatct
cccacacccactatggtatttgagaggagggaaagaattcccttcaatgaagatcgaaac
aatttgccctctgttcccaagtcaatatctgaaactgataaatctcctaacatactgaaa
gttgagcctcaaattcctaaagaggattcaaactctgcaaatgaagaagaaatcattgaa
ggtctgatgcaaactcatgatataacattaagtaatcttcgctcccgcttgacaaagtta
caggtggtgcaacatttttgggaacgtaacgatattaaaggtgctaccaatgctttgaaa
aagcttcctgatcaatctgttcaagcagatgttatcagtgtccttgtggaaaagatggag
attttcaccatggatttattttcttgcttacttcctgtgctcacaggcttgctggacggc
aagatagaaagacatgtaaaggtttcactggatatgctgttaaagcttgtagcagttttt
ggtccaacaatacgtgcaactgtttcagcacctccctctgttggtgttgatctacatcaa
gaggaaaggcgggaatgctgcaaccagtgctttatggaactgcaaaagatccaaatgatt
cttccaatactgatacggaggggtggtttattggccaagtctgccttagagctaaatctt
gttcttcaacagtcctaa

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