Cajanus cajan (pigeon pea): 109803482
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Entry
109803482 CDS
T04868
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1
KO
K13103
tuftelin-interacting protein 11
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccaj03041
]
109803482
Spliceosome [BR:
ccaj03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
109803482
Other components
Complex C specific factors
109803482
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GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
T2SSM
Motif
Other DBs
NCBI-GeneID:
109803482
NCBI-ProteinID:
XP_029128219
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Position
8:complement(9096298..9103874)
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AA seq
870 aa
AA seq
DB search
MDEDQEMERFGMDNDYEGGQWIGGEFYYKKRKEKRTQTKDDVLYGVFADSDDNEDDDYSS
RKRRRDRDFSKKPDLTKPVNFVSTGIFMPNQEIDNKSKELDEKDGYVSEDRPGLGLGFGM
GSATTSGSGLGFNSSNSAKGSVRNDDSDENDDNTFLPTAFGKKIKEGAMRREKERERERL
EKKRGKHQSLGQDGSGDVGKFEKHTKGIGMKLLEKMGYKGGGLGKNEQGILAPIEAKLRA
KNSGIGFNESKETMPLPALQQEKKSVPEVTQPAVGRTKERSWSKQARLKKKKDEEYITAE
ELLASKQEQELEVVQKVYDMRGPQVRVLTNLSDLNAEEKAKENDVPMPELQHNIALIVRL
AETDIQEIDRDLRRERETALSLKKEKEKLETEAAFQKQQLDNLEEIMSLLDHVGEENTLG
TLTLDSLARCFGDLRKRYADNYKLCNLSCIACSYALPLFIRVFQGWDPLRNPSHGLELVS
QWKELLQGEDSFDIWDVSSPYTLLVSEVVLPAVRISGINTWQARDPEPMLWFLESWEKLL
PSSVLATVLDNIIMPKLSSAVDTWEPHRETIPIHTWVHPWLPLLGHKLEGIYQVIRFKLS
TVLGAWHPSDGSAYAILSPWKTVFDSASWEQLMLRFIVPKLQLVLQEFQVNPANQNLDQF
YWVMNWASAIPIHLMVDMMEKFFFAKWLQVLYHWLCSSPNFEEVTKWYLGWKELIPKELL
ANESIRYQLNRGLDMMNQAVEGMEVVQPGLKENISYLRVLEQRQFEAQQKAAAYAQQQAA
ASLGGTANVDGVHELSLKEVIEAHAQQHGLLFKLKPGRMHNGHQIYGFGNVSIIIDSLNQ
KVYAQNEDTWSLESLQGLLELHNKSLTKRR
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggatcaagagatggagagatttggaatggacaatgattatgagggtggtcaa
tggatcggtggcgagttttactataagaaacgtaaagaaaagcgcacgcagaccaaagat
gatgttctttatggagtttttgcagattctgacgacaacgaagatgatgattattcgagt
agaaaacggagaagggatcgcgatttttcgaagaagcctgacctcaccaagcctgtgaat
tttgtgtctacaggcatttttatgcctaatcaggaaattgataataagtccaaagagctg
gatgagaaagatggttatgttagtgaggataggccgggattaggtttaggctttggtatg
gggtctgctaccacttctgggtctggtttaggctttaattctagtaattctgcaaaaggt
tctgtaagaaatgatgattctgatgagaatgatgataatactttcttgcctacagcgttt
gggaagaagattaaggagggggcaatgagaagggaaaaggaaagggagagggagaggttg
gagaagaagagggggaagcatcagagtttaggtcaagatgggtctggtgatgttgggaaa
tttgagaagcatacaaaagggatagggatgaagctgttggagaagatgggttataaagga
ggtgggctcgggaagaatgagcaaggtattctggctcctattgaggcgaaattgagggcc
aagaattctggtattgggtttaatgagtctaaggagactatgccgttgcctgctttgcag
caagagaagaagagtgtgcctgaagtcacccaacccgcggttggcagaacaaaagagagg
tcttggtcaaaacaagcaagattgaaaaagaaaaaagatgaagagtatataactgctgag
gagttgttggcgagcaagcaagaacaagagttggaggttgttcagaaggtttatgatatg
agggggccacaagttcgagttttaacaaatttgtctgatttgaatgctgaggagaaagca
aaagaaaatgatgtccccatgccggaacttcagcataacatagcattaatagttcggttg
gcagagactgacatccaagagattgatagagatttgaggagagagagggagacagcactt
agcttgaaaaaggaaaaagagaagttagaaactgaggcagcatttcaaaagcagcagctg
gataatttggaggaaataatgagtttgttagaccatgttggagaagagaacactttggga
acgttaacattggattcccttgctcggtgcttcggtgacttacgcaaaagatatgctgat
aactacaagttgtgtaacttgtcatgcattgcttgctcatatgctctgcctctgtttatc
agagttttccaaggatgggatcctcttcgaaatccatctcatgggttggagttggtatcg
cagtggaaggaactacttcaaggagaagattcttttgatatatgggatgtatcatcacct
tatactctgttggtttcagaggttgtattgccagctgttagaatatctggcatcaatacc
tggcaggcacgggatcctgagccaatgttatggtttctggaatcctgggaaaagttgctt
ccttcttcagtccttgctaccgtattagacaatataatcatgccaaaattatcaagtgct
gtagatacttgggagccacatcgtgagactattcctattcacacttgggtgcatccatgg
ttaccactgctgggacacaagttggagggtatttaccaggtgattcgatttaaattgagc
actgttcttggtgcctggcacccaagtgatggttctgcttatgctatattgtctccatgg
aagactgtatttgattctgcaagttgggaacagcttatgcttcgttttattgtaccaaag
ttgcagcttgtcttgcaagagttccaagtgaacccagcaaatcagaatcttgatcagttt
tattgggtaatgaactgggcttctgctattcctattcatcttatggttgatatgatggag
aaattcttctttgccaaatggcttcaggttttgtatcattggttgtgctcaagtcctaac
tttgaagaagttacaaaatggtatttggggtggaaagaactcattccaaaggaacttttg
gcaaatgaaagtatcagataccagcttaatcgtggtcttgatatgatgaaccaggctgtt
gaaggtatggaggttgtccaacctggtttaaaggagaatataagttatcttagggtactt
gagcaaagacaatttgaggctcaacaaaaagcagcagcatatgcccaacagcaagctgct
gcaagcttgggcggtacggccaatgttgatggtgtgcacgaattgagcttgaaagaagtc
attgaagcccatgctcagcaacatggtttgctattcaagcttaaacctgggagaatgcac
aatggtcatcaaatatatgggtttggtaatgtcagcataataatagactctctaaatcaa
aaagtatatgcccaaaatgaagacacatggtctttggaatctcttcaaggcttgctagag
ttgcataataaatcccttaccaaaagacgctga
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