Cajanus cajan (pigeon pea): 109803519
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Entry
109803519 CDS
T04868
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3 isoform X1
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccaj03041
]
109803519
03036 Chromosome and associated proteins [BR:
ccaj03036
]
109803519
Spliceosome [BR:
ccaj03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
109803519
Chromosome and associated proteins [BR:
ccaj03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
109803519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
RRM_1
TPR_14
HAT_Syf1_CNRKL1_C
Lsm_interact
UTP6_C
xRRM
ARM_TT21_5th
HAT_Syf1_M
Motif
Other DBs
NCBI-GeneID:
109803519
NCBI-ProteinID:
XP_020220721
LinkDB
All DBs
Position
8:complement(20305538..20324613)
Genome browser
AA seq
847 aa
AA seq
DB search
MEQNLTSATEAELEKDKVVADSDQRMGQSLAPSSEAGCGKDKAMADSDDSDSEDEAQQNL
QLESLQTELAANPSNYDAHLQYIALLRRTGDVDQLTIAREAMSELFPLSPTMWLQWIKDE
LSIDTASRPEAFSRILKLYERGVFDYLSVSLWCDYINFVQEFDPIVRQCTPTGISKTRDL
FESALTAAGLHVAEGNKIWEAYRQYEQAILLTIDDTDAQAKEKQVQHIRSLFHRQLSVPL
ADMSSTLTAYKTWEVEQGNLQDVESIELVDIYPHVASSYQKALEMYNARFHLEEQILSSN
VSNSERLQHYMNYLKFEQSFGTPARIQVLYERAITDFPVSPDLWLDYTRNLDNTLKVGNI
VSNVYSRATKNCPWIGELWVRYMLALERGHASEKDLSDVFEKSLQCTFSTLDEYLDLFLT
RVDGLRRRMTSTGEQDLEYKIIRETFQRASDYLSPYLKNTEGLLHLHAYWARLETKLGKD
ITAARGVWESCLKICGSMLEAWNRYIEMEVELGHINEARSIYKRCYSKRFSGTGSEDICH
SWLRFEREFGKLEDFDHALHKVTPRLKELQLFRIQQESKSAEESEKNTKRNAREKRKMGS
DITEEQSSYKRLRDVGNPEKAPEENKHQVQNSSQVTKVEGVNWKNTKIDDNPSEQQFSHE
KNRAYSDHCTAFISNLHPTANYEHIRNFFSDVGGIVAIRILHDKFTGKSRGLAYVDFMDD
EHLAAAIAKNKQKLIGKKLSIARSDPKRGGRESSNPKTLKEHVHTTNHSSQKGSLSKETE
DTYKEDVKDAKLSSTKPGNDNIQLKGKNTFAVPRNVRPLGFTANKPKAEDADEKPKSNEE
FRKMFIR
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaaacctaacctcagccacagaagcagagctcgagaaagataaagtcgtggct
gattccgaccagaggatggggcaaagtctagccccgagctcagaagcagggtgcgggaaa
gacaaagccatggctgattccgacgattctgattcagaggacgaagctcagcagaacctc
caactcgaatccctccagaccgagcttgctgctaacccctccaactacgatgctcatttg
caatacatagcgcttttgaggagaacgggtgatgttgatcagctgacaatagcccgggaa
gctatgagtgaactctttccgttgagccctacaatgtggctccaatggatcaaagacgag
ctttctatcgacactgcttctcgacccgaggctttctctagaattctgaagctttacgaa
cggggggtctttgattacctgtctgtatctctctggtgtgactacattaattttgtccaa
gagtttgatccaattgtacgccaatgtacacctactggtatttctaagacaagggatttg
tttgagagtgcccttactgcagccgggttgcatgttgctgaaggcaataaaatatgggaa
gcatacaggcaatatgagcaggctatacttttaaccatcgatgatactgatgcacaggcc
aaagaaaagcaagtccaacacattcgtagtttattccaccgccaattgtctgttcctctt
gctgatatgagttcaacacttacagcctataagacctgggaggtggaacaaggaaatctt
caagatgttgaatccattgaattggttgatatttatcctcatgttgcatcttcgtaccag
aaggccttggagatgtataatgctcgttttcatcttgaagaacagattttgagctcgaat
gtttcgaattcagaaagactacaacactacatgaactatttgaaatttgagcagtctttt
ggaacgccagctagaattcaagttctatatgaacgagctataactgactttcctgtatct
cccgatctctggcttgattatactcgcaacttggacaacactttgaaggttggaaatatt
gtcagcaatgtttattctagggcaactaagaattgcccttggattggagaactttgggtt
cggtatatgcttgccttggagcgtggtcatgcttctgagaaagacttgtctgatgtcttt
gagaagtccctgcaatgtaccttttcaactctggatgagtatcttgatttgtttcttact
cgggtagatggcttaaggcgaagaatgacatccactggtgaacaggatttggaatataaa
ataataagggagacctttcagcgtgcatcggattatctatcaccttacttgaagaataca
gagggtttgctacatttacatgcttattgggcccgtttagaaacaaaacttggaaaagat
ataactgcagctcgtggagtttgggagagttgtcttaaaatatgtggttcaatgttggag
gcatggaatcgttatatagaaatggaagtggaattgggtcacataaatgaagcaagatcc
atatacaagagatgctacagtaagagattttctgggactggttcagaggacatatgtcac
tcatggttacgctttgagagggaatttggcaagttggaagattttgatcatgcattacac
aaggttacccctcggcttaaagagctacagttatttaggatacagcaggaatccaagtcg
gcagaggaaagtgaaaagaatacaaagagaaatgctcgtgaaaagagaaagatggggtcg
gatataactgaagaacagtcttcatacaagcgacttagagatgttggaaatccagagaaa
gcacctgaggagaataaacatcaagtgcagaactcttctcaggtgacaaaagtggaaggg
gtcaattggaagaatactaaaattgatgataacccaagtgagcaacagtttagccacgaa
aaaaacagagcatattctgatcactgcactgcttttatatcaaatcttcatcctacggca
aattatgaacatattcgtaatttcttcagtgatgttggtggaattgttgccatacggatc
ctgcatgacaaattcactggaaaatcaaggggactagcatatgtggacttcatggatgat
gaacaccttgctgctgcaattgctaagaacaagcaaaagttaattggaaagaagctaagt
attgctcggtctgacccaaagcgaggtggaagggaatcttctaatccaaagacattgaaa
gaacatgtacatacaactaatcattctagtcaaaaaggttccttatccaaagaaactgag
gatacttacaaggaagatgtaaaggatgcgaagttgtcttctacaaagccaggaaatgat
aatatccagcttaaagggaagaatacttttgccgtgcctagaaatgtccgacctcttggt
tttactgcaaataaaccaaaagcagaagatgcggatgaaaagccaaaatccaatgaagaa
ttcagaaagatgttcattcgttaa
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