Cajanus cajan (pigeon pea): 109803525
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Entry
109803525 CDS
T04868
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 1 isoform X1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccaj01009
]
109803525
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccaj03021
]
109803525
Enzymes [BR:
ccaj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
109803525
Protein phosphatases and associated proteins [BR:
ccaj01009
]
HAD phosphatases
Fcp/Scp phosphatases
109803525
Transcription machinery [BR:
ccaj03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
109803525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
NIF
DSRM_2
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
109803525
NCBI-ProteinID:
XP_020220728
LinkDB
All DBs
Position
8:17754801..17762845
Genome browser
AA seq
954 aa
AA seq
DB search
MHKCLVYQREMVLGEVEIYLEENKNMDLNEIRISHFSQPSERCPPLAVLHTITCGVCFKM
ESTSSQTRQQQDALFHLHSSCIRENKTAVMPLSGEEIHLVAMYSRNDDRPCFWGFIVAPG
LYNSCLAMLNLRCLSIVFDLDETLVVANTMRSFEDRIEVLHRKINSEVDPQRISGMQAEI
KRYLDDKNILKQYAENDQVVDNGKVIKIQSEIVPPLSDSHQPIVRPLIRLQEKNIILTRI
NPQIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVFVCTMAERDYALEMWRLLDPELNLIN
SKELLDRIVCVKSGLKKSLFNVFQNGLCHPKMALVVDDRLKVWDEKDQPRVHVVPAFAPY
YAPQAEASNAVPILCLARNVACNVRGGFFKDFDDGLLQKIPLIAYEDCIKDIPFPPDVSN
YLVSEDDASASNGNKNPLFDGMANAEVERRLKDTISASSTVPAMTATIDPRLAFTSLQYT
MVSSSGTVPPPTAQASVMQFGSVQFPQPNTLVKPMRQVTPPEPSLHSSPAREEGEVPESE
LDPDTRRRLLILQHGQDTREHTSSEPPVPIRHPIPVSAPSVPSRRGWFSAEEEMGPQQLN
RLVPKEFPIDSEPLHIEKHWPCHSSLFSKGVDSISSDRVLHESHQRFPKEVHHRDDRSRS
SQSISSYHSFPGDDIPLSGSAYSNRDFDSESGHSLFHADTTSGVLQEIALKCGTKVEFLS
SLVSSTELQFSIEAWFAGKKIGEGIGRTRREAQHKAAECSIKQLADIYMSHAKDDSGSTY
VDVSGFHGSNNNGFVSSGNSPGNQPLLKEESASFSTAESSRGLDPRLEVSKRSVDSISAL
KELCMMEGLAASFQSPPTPASNFPQKDEVYAQVEIDGMVFGKGIGLTWEEAKMQAAKKAL
GSLRTTLNQGKRKREGSPRPLQGLPNKRVKQEYPRTLPRIPYSSRYPRNAPIAP
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgcataagtgtttggtgtaccaaagggagatggtactgggagaggtagagatataccta
gaagagaacaagaacatggatctgaacgaaatcagaataagtcacttctcgcaaccaagt
gaaaggtgtccaccgcttgcagtgcttcacaccattacttgcggtgtttgcttcaaaatg
gagtcaacgtcctcacagacacgacaacagcaggatgccctctttcacttgcactcttcg
tgtatcagggagaacaagactgccgtaatgccactgagtggggaagaaatacatttggtt
gcaatgtattcacgtaatgatgatagaccatgtttctggggatttattgttgctcctgga
ctttacaattcatgccttgcaatgttaaatctgagatgtttgagtatagtgtttgatcta
gatgaaactctggtggtggcaaatacaatgcgttcttttgaggatagaattgaggtgctg
catagaaaaataaactcagaggtagatccacaacggatttctggtatgcaggcggagatc
aagcgatacttagatgacaagaatatattgaagcaatatgctgaaaatgatcaagttgtt
gataatgggaaagtgataaaaattcaatctgagattgttccaccattgtctgatagtcat
cagcctatagttcgaccactgatccgattacaggaaaagaatatcattctcacacgcatc
aatccacagattcgcgataccagtgttcttgtgaggttgagacctgcatgggaagatctc
cggagctaccttactgcaagagggcgcaagcgttttgaggtttttgtttgcacaatggct
gagagggactatgcactagaaatgtggaggcttcttgatccagaattgaatttgataaat
tcaaaagaactgttagatcgtattgtttgtgtcaagtctggtttaaagaaatcattgttt
aatgtattccaaaatggcttatgccatcccaagatggcattggtagttgatgatcgcttg
aaagtgtgggatgaaaaagaccaacctcgggtgcatgttgtgcctgcatttgctccatac
tatgctccacaagctgaggcaagcaatgcagtccctatcttgtgtcttgcaagaaatgtt
gcttgcaatgttaggggtggcttcttcaaggattttgatgatggtcttttacaaaagatc
cctctaattgcttacgaagattgtatcaaagatataccttttcctcccgatgtgagcaat
tatctagtttcagaggatgatgcatctgcttccaatggaaataaaaatccactatttgat
ggcatggcaaatgctgaggtagaaagaagattaaaggacacaatatcagcttcttcaact
gtccctgcaatgactgctactatagatcctaggcttgcttttacttctcttcaatacaca
atggtgtcttcttctggaacagttccacccccaacagcgcaagcatctgtgatgcaattt
ggcagtgttcagtttcctcaacctaatactctagttaaaccaatgcgtcaagttactcct
ccagaaccgagtttgcatagttctcctgctagagaagagggtgaagtacctgaatcagaa
ttagacccagatacaaggcgtaggcttctcatattgcaacatgggcaagatacaagggag
cacacgtcaagtgaacctccagttcccattagacaccccataccagtttctgctcccagt
gtcccatcacgtaggggctggttttctgcagaagaggagatgggtccacaacaactaaat
cggctagtacctaaagaattccccattgattctgaaccattgcatattgagaagcactgg
ccttgtcactcatcccttttctccaagggtgtcgattctatttcatctgatagagttctc
catgagagccaccaaagatttccaaaggaggtgcatcatagggatgatcgctcaagatcg
agccaatcaatctctagttatcattctttcccaggtgatgatattcccttgagtggttca
gcttacagcaacagggattttgactctgaatccggacattctctatttcatgccgatacg
acatctggagtattacaggaaattgcactgaagtgtggaactaaagtggaatttttatcg
tcattggtttctagcacagaactgcaattctccattgaggcatggtttgctggaaaaaaa
attggtgaaggaattggtagaactagaagggaagcccagcataaggctgctgagtgctca
atcaaacaattggctgatatatacatgtctcatgctaaggatgattctggttccacttac
gttgatgtgagtgggtttcatggttcaaacaacaatggctttgtgagtagtggaaattct
cctggtaatcagccattgcttaaagaagagtcggcctcattttcaactgctgagtcatct
aggggtttagatcctaggttggaagtctccaaaagatcagtggattcaatttctgccctc
aaagaattgtgcatgatggagggtcttgctgccagtttccaatctccaccaacccctgca
tcaaattttcctcagaaagatgaagtgtatgcacaggttgaaatagatggtatggtcttt
ggcaaagggattggattaacatgggaagaggctaaaatgcaggctgccaagaaggctctt
ggaagtctaagaacaacacttaatcaaggaaagcggaagagggagggttcccccaggcca
ctacaaggattgccaaataaacgtgtaaagcaagaatatcctcgaactctgccgcggata
ccctattcttctagatatcccaggaatgctcctattgctccttga
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