Cajanus cajan (pigeon pea): 109803646
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Entry
109803646 CDS
T04868
Name
(RefSeq) DNA polymerase lambda isoform X1
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03410
Base excision repair
ccaj03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
109803646
03450 Non-homologous end-joining
109803646
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccaj03400
]
109803646
Enzymes [BR:
ccaj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
109803646
DNA repair and recombination proteins [BR:
ccaj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
109803646
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
109803646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_8
NTP_transf_2
BRCT
BRCT_2
HHH_5
PTCB-BRCT
LIG3_BRCT
Motif
Other DBs
NCBI-GeneID:
109803646
NCBI-ProteinID:
XP_020220905
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All DBs
Position
8:9523075..9559017
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AA seq
532 aa
AA seq
DB search
MAPKKKPESDPHGMFAGIVVFLVPKGVQARRFQIWKERLVQMGAVVEERLSKRVTHVCAM
HSDALLQQLDRERLSRFKGRVLLYQWLEDCLKSGELLSEDGYALKLDPEGEHTPEKSLDP
GPTNQSTSSDPQQLLNKKRKLSAEDTTIVNHESDDDGREKVIFSSTSTASSHGEVDSLSY
GNTRTQHNGENEVSSLSYCPPDLNKNITEIFGKLVNIYRALGEDRRSFSYYKAIAVIEKL
SFKIESADQINNLPSIGKSMKDHVQEIITTGKLSKLEYFETDEKVRTISLFGEVWGIGPS
TALKLYEKGHRSLDDLRNDDSLTNAQKLGLKYFDDIRQRIPRHEVQEMDRILQKVGEDVL
PGVVIICGGSYRRGKASCGDIDIIITHPDGKSHKGFLPKFVKHLKDMNFLREDLIFSVHS
EEGTDSGVDTYFGFCTYPGRELRHRIDLKVYPRDIYAFGLVAWTGNDVLNRRLRLQAESK
GFRLDDTGLFPATLGSGGKRGAKGSASLKFHTEKEVFDFLDFPWLEPHERNL
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggcgccaaagaagaaacccgagtccgatcctcatggaatgttcgctgggatcgttgtt
tttttggtccccaaaggagttcaagcacgtcgatttcagatttggaaggagaggttggtg
caaatgggtgccgtggtagaggagcgcctctccaaacgggtcactcatgtctgtgctatg
cactcagatgcccttcttcagcaactggatagggagcgtttgtcacgttttaaagggaga
gttctcctttatcaatggctagaggactgcttgaaatcaggggagttgctatccgaggat
gggtatgcactgaagttggatcctgaaggtgaacatacacctgagaagtctttggaccct
ggaccaactaatcaaagcacttcaagcgatcctcagcaattgcttaataaaaagagaaaa
ttatctgctgaggatacaacaattgtaaatcatgaaagtgatgatgatgggagagaaaaa
gtgatattttcatcaacaagcacagcaagcagtcatggcgaagttgacagtttaagttat
ggaaacactagaacccaacacaatggtgaaaatgaggtgtcatcattgtcatactgtcca
cctgatctaaacaagaacataacagagatatttgggaaacttgtgaacatatatagagca
ttgggtgaggatcggaggtcctttagctattacaaggctattgcagtgattgagaagttg
tcatttaaaattgaaagtgccgaccagataaacaacctaccatccattggcaaatcaatg
aaagatcatgttcaggagataataactactgggaagttatccaaattggaatactttgaa
acggatgagaaggtgcggacaatatccttatttggagaagtatggggcataggtccatcc
acagcacttaaattgtatgagaagggtcatcgttcattagatgatcttaggaatgatgat
tcacttacaaatgcacaaaagttagggttgaagtactttgatgatatcaggcaacggatt
ccacgccatgaggttcaagagatggatcgcattttacaaaaagttggggaggatgttttg
cctggggttgttatcatttgtgggggatcgtatcgacgtgggaaagctagctgtggggac
attgatatcattataacacatcctgatggtaaaagtcacaaaggatttttaccaaagttt
gtaaagcatttaaaagatatgaatttcctaagggaggatttaattttcagtgttcacagt
gaagagggtactgattctggtgtggacacttactttggtttttgcacctatcctggacgg
gagttgcggcatcgtattgatctaaaggtgtacccaagagacatatatgcatttggactt
gtagcttggactggaaatgatgtcttgaataggaggttgaggctgcaagcagaatcaaaa
ggattccgacttgatgatacagggttgtttccagctactctaggttctggtggcaaacgg
ggtgcaaaaggtagtgcaagtttgaaatttcataccgaaaaggaggtatttgatttcctg
gacttcccttggctggaaccacatgaaagaaatctctaa
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