Cajanus cajan (pigeon pea): 109803897
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Entry
109803897 CDS
T04868
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109803897
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccaj03019
]
109803897
Messenger RNA biogenesis [BR:
ccaj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
109803897
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
109803897
NCBI-ProteinID:
XP_020221157
LinkDB
All DBs
Position
8:15125488..15130104
Genome browser
AA seq
478 aa
AA seq
DB search
MEMDPGKLFIGGISWDTNEDRLRQYFQNFGDVVEAVIMKDRITGRARGFGFIVFADPSVA
ERVVMEKHVIDGRTVEAKKAVPRDDQNVLNRSNSSSHGSPGPTPTRTKKIFVGGLASTVT
ESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEGVEKVLHKTFHELNGKMVEV
KRAIPKELSPGPSRGQLGGYVYGISRVSNFPNGCIQGYNPNLVGGNGLRIDGKMSPVTVG
RSGYPLLSPTYATGLNFEPQLSQNESANFTSNFVLGRALNSYSASPSRYNNAIGYAGSSV
GNNSTISSTNQNLWGNGNLNYATNPTSSDAFVGYGGENSSMGSFGSIGSLWSSSLGTDQA
GTIGSGFGRSSLSYRSGDMILGSKTVGYGKGSESIAASASSFALSNGSYDEAYKDSYETG
PFYQDHTWRSSASELEDSDSLGFGLENVVSDLMSKSSGDHIRAYAVAANRQSNRGIAA
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggaccctggcaagcttttcattggcgggatttcatgggacacaaatgaagac
cgactcagacagtatttccagaattttggagatgtagttgaagctgtgatcatgaaggat
cgcatcacggggcgtgcccgtggattcggatttattgtttttgctgatccttctgttgct
gagcgagttgttatggagaagcatgtcatagatggtagaactgttgaagcaaagaaggct
gtccctagagatgatcagaatgttctgaacagaagcaacagcagcagtcatgggtcacct
ggtccgactcctacccgcacaaagaaaatatttgttggaggtctggcatccacagttact
gagagtgactttaagaagtactttgatcaatttggaacgattacagatgttgttgtgatg
tatgatcataacactcaaaggcctagaggttttggattcatcacatacgattctgaggaa
ggagttgagaaagtgctgcataaaactttccatgaactgaatggtaaaatggttgaggtt
aagagggccattccgaaggaattatctccaggtccaagtagaggacaattaggtggatat
gtttatggtataagtagagttagtaactttcctaatggttgcattcaaggatataatcca
aaccttgttggtgggaatggactaagaatagacggtaagatgagtcccgttactgttggc
cgtagtggatatcctcttttgagtcctacttatgcgacaggactcaactttgagccacaa
ttgagccaaaatgaaagtgcaaacttcacatctaactttgtcttaggacgggcattgaac
tcttatagtgcaagtccaagcaggtacaataatgccataggttatgctggttcaagtgtt
ggcaacaattcaaccataagttctacaaatcaaaatttgtgggggaatggaaaccttaat
tatgctactaaccctacaagctctgatgcttttgttggttatggaggtgaaaattcaagc
atgggttcttttggtagtattggatcactttggagttcctcacttggtactgatcaagct
ggaactattggctctggatttggtaggagcagtcttagttataggtctggagatatgatt
ttagggtcaaaaacagtaggttatggaaaaggcagtgaaagcattgctgcatcagcttca
tcatttgctttatcaaatggcagttatgatgaagcatacaaagattcttatgaaactgga
ccattttatcaggaccacacttggagatcatcagcttcagaactagaggattctgactct
cttggttttggccttgaaaatgttgtttcagatttaatgagcaaaagctctggtgaccac
attagggcttacgctgttgctgctaatagacaatcaaatagaggaattgctgcctag
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