KEGG   Cajanus cajan (pigeon pea): 109804080
Entry
109804080         CDS       T04868                                 
Name
(RefSeq) ribosome biogenesis protein BOP1 homolog
  KO
K14824  ribosome biogenesis protein ERB1
Organism
ccaj  Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:ccaj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ccaj03009]
    109804080
Ribosome biogenesis [BR:ccaj03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    109804080
SSDB
Motif
Pfam: BOP1NT WD40 WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st EIF3I ANAPC4_WD40 Beta-prop_Vps41 WDR55 Beta-prop_TEP1_2nd Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_DCAF12 Frtz Beta-prop_SCAP Spindle_Spc25 WD40_like Beta-prop_WDR11_1st
Other DBs
NCBI-GeneID: 109804080
NCBI-ProteinID: XP_020221436
LinkDB
Position
8:19984351..19992762
AA seq 727 aa
MKGKKKTMTQNDDEGAPSPSEKLPSPVVSDYDSESDSDYEDSSAGNDESSDSLDSLSESD
LDDASPENDSAGNSEPAENELSQDEDIVNDEDSESESSDLHQEGAESDSSEDEVAPRNTI
GDVPLKWYEDEPHIGYDIKGKKIKKKEKQDKLDSFLANVDDSKNWRKIYDEYNDETIELT
KDEIKLVRRLLKNRAPHPDFDPYQDYVDWFKWDDAKHPLSNAPEPKRRFIPSKWEAKKVV
KYVRAIRNGYNPFDKPKEEDGPYLLWGDDSGSTEKANYLSYIPAPKQKLPGHDESYNPPL
EYIPTQEEINAYQLMFEEDRPKFIPKRFTSMRSIPAYENAMKDCFERCLDLYLCPRVRKK
RLNIDPESLKPKLPSRKELKPYPITCYIEYKGHEDAVTSISVEASGQWMASGSSDGTVRI
WEVETGRCLKRWEVGEAVNCVAWNPLPDIHILAVCVGQDVLLLNTCLGDEEEQKCIKELL
WVDSTIASDDSGNKAPSVSWLKDDKHMGLRLRHFKTVTALEWHRKGDYFSTVMPAGESRS
VLIHQLSKKLTQKLPFKLHGLAVRSTFHPSRSIFFVCTKQSVRVYDLLKTKIIKKLDTGL
REASSIAVHPGGDNLIVGSKEGKMCWFDMDLSSKPYKILKCHPKDINNVIFHRSYPLFAS
CSDDCTAYVFHGMVYSDLNQNPLIVPLEILRGHTSSNGRGILDCKFHPRQPWLFTAGADK
LIKLYCH
NT seq 2184 nt   +upstreamnt  +downstreamnt
atgaaggggaagaagaagaccatgacgcaaaacgacgacgagggagctccctctccatct
gagaagctaccttcaccagtagtatccgattacgattccgaatccgactctgattacgag
gactcttctgcaggtaacgacgaatcttctgactcgctggattctctatctgaatcagat
ttagatgatgcttcacctgagaatgatagcgctggcaattctgaacctgcagaaaatgaa
ttatctcaagatgaggacattgtcaatgacgaagacagtgaaagtgagagttccgatctc
catcaggaaggagctgagagtgactcctctgaggatgaggtggctcctcgaaacaccatt
ggagatgtgcctttgaagtggtatgaggatgaacctcatattggatacgacatcaagggc
aagaagattaagaaaaaagaaaagcaagacaagttggattcatttctagcaaatgttgac
gattctaagaattggaggaagatctatgatgagtataatgatgagacaattgagctgaca
aaagatgaaatcaaacttgtccgaagactactcaagaatcgggcaccacatcctgacttc
gatccatatcaggattatgttgactggtttaaatgggatgatgccaagcatccattgtct
aatgcacctgaaccaaaaagaaggtttattccttcaaagtgggaagctaaaaaggttgtg
aagtatgttagagcaattcgcaatggatataacccttttgacaagccaaaagaggaagat
ggtccatatctcttgtggggagatgattctggttcaacagaaaaagcaaattatttgtct
tacattcctgccccaaagcagaaattacctggccatgatgagtcatataatcctccttta
gagtacattccaacccaagaagagatcaatgcttatcaattgatgtttgaggaagaccgc
cctaagtttattccaaaaaggtttacatctatgaggagcatccctgcatatgagaatgct
atgaaggactgctttgaacgttgtttggatttgtacttgtgccctcgagttcggaagaaa
cgtctcaatattgatcctgaatctttaaaaccaaagcttccaagtcgaaaggagctcaag
ccttatcccataacatgttatattgagtataaaggccatgaagacgctgttacatcaatt
tcagttgaagcttctgggcaatggatggcttcaggttcaagtgatggaactgtccgtatc
tgggaggttgaaactggccgatgtcttaagcgatgggaagttggtgaagctgttaactgt
gttgcctggaatcctctgcctgatattcatattctggccgtttgtgtgggacaagatgtt
cttctactgaacacttgtttgggggatgaagaagagcagaaatgtattaaggagcttctc
tgggttgactcgacaatagcatcagatgactctgggaacaaagctcctagtgtaagctgg
cttaaagacgataaacatatgggtttaagattaaggcactttaagactgttactgctcta
gaatggcaccggaaaggcgattacttttcaacagtgatgccagcaggtgaatcaagatca
gtgctgatacaccagttatccaagaagcttacacaaaaacttccattcaaattacatgga
cttgctgttaggtcaaccttccatccatcccgttccatcttctttgtttgtacaaaacag
agtgttcgtgtgtatgatttattgaagaccaagatcataaagaagcttgatactgggctt
cgtgaagcctcatccattgcagttcatcctggaggcgataatttgattgtgggtagcaag
gaggggaagatgtgttggtttgacatggacctttcatctaaaccgtataaaattcttaag
tgtcacccaaaagatatcaacaatgtcatctttcatcgctcctatcccttatttgcttca
tgttcagatgactgcactgcatatgtttttcatggaatggtttattctgatctcaatcaa
aatcctcttattgtgcctttggaaattttacgaggtcataccagttcaaatgggagaggg
atactggactgtaagtttcatccaagacagccatggttatttacggctggtgctgataaa
ctgattaaactttactgtcattaa

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