Cajanus cajan (pigeon pea): 109804438
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Entry
109804438 CDS
T04868
Name
(RefSeq) RNA-binding KH domain-containing protein PEPPER
KO
K21444
poly(rC)-binding protein 3/4
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccaj03019
]
109804438
Messenger RNA biogenesis [BR:
ccaj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
109804438
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Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
MOEP19
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
109804438
NCBI-ProteinID:
XP_020221852
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Position
8:complement(10841380..10848687)
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AA seq
430 aa
AA seq
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MATAQNGTAAKSLSPPDNASAETEFEAAAPEKRWPGWPGDCVFRLIVPVGKVGSIIGRKG
ELIKKMCEETRSRIRVLDAPLATPDRIVLVSGKEELEAALSPAMDAVIRVFKRVSGLSET
DAENKDSAAGLAFSSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEVKLYAT
ADERIVEMQGEAFKVLKALEAVVGHLRKFLVDHSVLPLFEKTYNAPISQDRQAETWSDKS
LLHTTSQTSIFADIPLSTKRDSILADRESQLDSLLPSSTMSLYGQESSLSGIRSSALGRV
GAPIVTTVIQTMQIPLSYAEDIIGIQGANIDYIRRTSGAILTVQESRVPDEIIVEIKGTS
SQVQTAQQLIQDVVSNHNEPVSSSYGRLDAGLRSSYSQLGPASRLSSSLPSQPYTGYGAS
GLGDYSTFRL
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgcccagaacggcaccgccgcgaagtcactctcgccgccggacaatgcctcc
gccgagacggagttcgaggccgccgcgccggagaagagatggccggggtggcccggcgac
tgcgtcttccgtctcatcgtgccggtggggaaagtgggaagcatcattgggcgcaaggga
gagctcataaagaagatgtgcgaagaaactcgatcccgcattcgcgttctcgacgctcct
ctcgccactcctgatcgaattgtacttgtatcagggaaggaagagctggaggcagctctt
tcccctgcaatggatgctgtaataagggtattcaagcgagtctctggattatctgaaact
gatgctgagaacaaagattctgctgctggtcttgcattttcttcaattcgtttattggtg
gcatcaacacaggctattaatttaattggaaagcaaggctcgttaatcaaatctattcag
gagagtaccggtgcttctgttagagtactgtcaggagatgaggtgaaactttatgctact
gcggatgagagaattgttgaaatgcaaggagaagccttcaaggtccttaaagctctagaa
gcagtagttggccatcttaggaaatttttggttgatcatagtgttcttcccctatttgag
aaaacttacaatgcgcccatctcacaagaccgtcaggcagagacatggtctgacaaatca
ctgctgcatactacttcacaaactagcatttttgctgatattcctctttcaacaaaaagg
gattctatcctagctgaccgagaaagtcaattggactcattactcccttcctccactatg
tctctctatggacaagaatcttcactttctggtattcgttcttcagctcttggccgtgtt
ggtgctcctattgttactacggtaatacaaacaatgcaaataccactgtcgtatgcggag
gacataattggtattcagggggctaatattgattacattcgccgcactagtggagccata
ttgactgtgcaggagagcagggtgcctgatgaaatcatcgtggaaataaaaggcacctca
tctcaggttcaaacagcacaacagttgattcaggatgttgtaagcaatcataacgaacct
gtctctagcagttacggcaggctagatgcaggtctgaggtcttcatactctcagttgggc
cctgcatcacgcctctcatcttccttgccctcacaaccatacacaggttatggagcttct
ggtttaggagactacagtacattcaggctttaa
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