KEGG   Cajanus cajan (pigeon pea): 109804461
Entry
109804461         CDS       T04868                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 8B
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
ccaj  Cajanus cajan (pigeon pea)
Pathway
ccaj03020  RNA polymerase
ccaj03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ccaj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    109804461
  09124 Replication and repair
   03420 Nucleotide excision repair
    109804461
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ccaj03021]
    109804461
   03400 DNA repair and recombination proteins [BR:ccaj03400]
    109804461
Transcription machinery [BR:ccaj03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     109804461
  RNA polymerase III system
   RNA polymerase III
     109804461
  RNA polymerase I system
   RNA polymerase I
     109804461
DNA repair and recombination proteins [BR:ccaj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      109804461
SSDB
Motif
Pfam: RNA_pol_Rpb8
Other DBs
NCBI-GeneID: 109804461
NCBI-ProteinID: XP_020221883
LinkDB
Position
2:21108853..21113625
AA seq 145 aa
MVENNLFEDIFRVEKLNPDDKKLFDKVTRIEARSEKFDMFMHLDINSEIYPLKVGQTFTM
VLVSTPNPDGTPDTGYYTQINRQSLANNFEYVMYGKLYRITEGSGREKAELNISFGGLLM
LLRGDTSHCNKFELDQRLYLLIRKV
NT seq 438 nt   +upstreamnt  +downstreamnt
atggtggagaataatctcttcgaggatatttttagggtcgaaaaattaaaccccgatgac
aaaaaattattcgataaagttactcgtattgaagcaagaagtgaaaagtttgacatgttt
atgcacctagacatcaattctgagatatatccattgaaagtgggtcagacgtttactatg
gtgcttgtttcgacacctaatcctgatggaacaccagatactggctattatactcagatc
aatcgacaatcactggctaacaattttgaatatgtcatgtatgggaagctctacaggatt
acagagggttctgggcgtgaaaaagcggaactaaatatttcatttggtgggcttctgatg
ctgctgaggggagatacatctcattgcaacaagtttgagcttgatcagaggttgtatctt
ttgataaggaaagtatga

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