| Entry |
|
|---|
| Name |
(RefSeq) BRCA1-associated RING domain protein 1
|
|---|
| KO |
| K10683 | BRCA1-associated RING domain protein 1 |
|
|---|
| Organism |
ccaj Cajanus cajan (pigeon pea)
|
|---|
| Pathway |
|
|---|
| Brite |
KEGG Orthology (KO) [BR:ccaj00001]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109804564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:ccaj03019]
109804564
04121 Ubiquitin system [BR:ccaj04121]
109804564
03036 Chromosome and associated proteins [BR:ccaj03036]
109804564
03400 DNA repair and recombination proteins [BR:ccaj03400]
109804564
Messenger RNA biogenesis [BR:ccaj03019]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
109804564
Ubiquitin system [BR:ccaj04121]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
109804564
Chromosome and associated proteins [BR:ccaj03036]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
109804564
DNA repair and recombination proteins [BR:ccaj03400]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
109804564
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
8:complement(12672365..12677242)
|
|---|
| AA seq |
682 aa
MDGSGKSTVSKTKLLNPWMLHFQKLALELKCPLCLSLFKRPVLLPCNHLFCDSCLADCIT
AGSECAVCNAKYTQTDVRHVPFVENVVAIYRSLDATFCASLFQQRSTGDAGVLEPCQELL
NSTSSSMKAAKLPRNLPNYSGVGAGKSQKSRILVHDKAEELELSCGRGKLAPMQSSHMEL
VVRGDCAVVEMDVNQVTQSAPDSPPFCDTKGSDNDCSDQDSGHPLPSDRLENSSLKRASA
GNVNLKGRMGQLRSESSASETEGLARDLKRQKVLDLKSGKDPGASLPTSASNDVCPTGSI
CSFCQSSRISEATGPMLHYANGNLVTGDAAMQSNVIPVHRSCIDWAPQVYFVDEVVKNLK
AEVARGAKLKCSKCNLKGAALGCYVKSCRRTYHVPCAMDISTCRWDNEDFLLLCPVHSNV
KFPCEKTRSKKQAIQKHPTLPHLPSHHSNPLEASQDDSKKLVFCGSALSNEDKVLLINYA
SKIGATVTKFWTSNVTHVIASTDGNGACSRTLKVLMAILNGRWVLKVDWIKVCIEEINPV
EEEPFEINLDNQGCQGGPKSGRLRALANEPKLFSDLKFYFSGDYVPAYKEDLEDLIEVGG
GTVLRSKEELEAQRHKCEVDSSKLLIVYNLDPPQGCKLGDEVSILWQRLNEAEDLAANTL
QVIGHTWILESIAACKLQPFVN |
|---|
| NT seq |
2049 nt +upstreamnt +downstreamnt
atggatggttctggaaagtccaccgttagtaaaaccaaactactgaatccatggatgctc
cacttccagaaactcgctctcgagctcaagtgccctctctgtttgagtttgttcaagcgg
ccggtgttacttccatgcaatcacttgttctgcgattcctgcttggctgattgtataacg
gctggttctgaatgcgctgtttgtaatgcaaagtatactcaaacagatgtaaggcacgtg
ccttttgtggaaaacgtggtggctatttacagaagcttggatgccaccttctgtgctagt
ctgtttcagcaacgctctactggtgacgcgggggttttggagccgtgccaagaattactc
aattcaacttctagtagcatgaaagctgccaagcttcctcggaatttgcctaattatagt
ggggtcggggctggcaagagtcagaaatccaggattctggtgcatgataaagctgaggag
cttgaattgtcttgtgggagagggaagctcgctccaatgcaatcttcccatatggaactt
gtggttcgtggagattgtgctgttgtggagatggatgtgaatcaagtgacacaatcagca
ccggatagccctcctttttgtgatactaaaggttcagataatgactgcagtgatcaagat
agtgggcacccattaccttctgatagattggaaaattcttcattaaagagggctagtgca
ggaaatgtaaatctgaagggaagaatgggacagttaagatctgaaagttcagcctctgaa
acagagggtcttgcaagggatctcaagagacaaaaagttctggaccttaaatctggaaag
gaccctggtgcatcactgcccacaagtgcttcaaatgacgtatgtccaactggaagtatc
tgttcattctgccagtcctctagaatctcagaggctactgggccaatgctgcattatgca
aatgggaacttagttacaggagatgcagcaatgcaatcaaatgtcatacctgtgcataga
agttgcattgactgggcaccccaggtgtactttgttgatgaagtagttaaaaatttgaag
gcagaagtggcaaggggagcaaaacttaaatgcagtaaatgtaatctaaagggagctgct
cttggctgctatgtcaaatcttgtagaaggacttatcatgttccttgtgcaatggacatc
tcaacttgccgatgggataatgaggattttctcttgctctgtcctgtccattcaaatgtc
aaatttccatgtgagaaaaccagatctaagaagcaggcaattcagaagcaccccactctg
cctcatctgccatctcaccactcaaatcctcttgaagcttcacaggatgatagtaaaaaa
ttggttttttgtgggtctgctctatcaaatgaagacaaggtacttttgatcaattatgca
agcaaaattggtgctactgtgaccaagttctggacatcaaatgtcactcacgtaattgca
tcaactgatggaaatggagcatgctctaggacattaaaagttctcatggcaattctaaat
ggacgatgggttctaaaagtggattggataaaagtatgcatagaagagataaatcctgta
gaggaagaaccatttgaaattaatcttgacaaccaagggtgtcaaggtggtccaaaatct
ggcagacttcgggcattggccaatgagccaaagctattcagcgatttgaagttttatttt
tctggggattatgtgccagcttataaggaagatcttgaagatttaattgaagtgggggga
ggtactgttttgagaagcaaggaagaactggaagcacaaagacataaatgtgaagtggat
tcttcaaagctgctgattgtttacaacctggatccaccacaaggatgcaagttgggggat
gaagtttcaattctttggcaaaggctaaacgaggcagaggatttagctgccaatactcta
caagtcattggtcacacgtggattcttgaatcaattgctgcatgtaaactgcagcctttc
gtaaactaa |
|---|
