Cajanus cajan (pigeon pea): 109804592
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Entry
109804592 CDS
T04868
Name
(RefSeq) cell division control protein 48 homolog C
KO
K14571
ribosome biogenesis ATPase
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
109804592
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccaj03009
]
109804592
Ribosome biogenesis [BR:
ccaj03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
109804592
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
AAA_14
AAA_16
AAA_22
AAA_2
TIP49
RNA_helicase
nSTAND3
AAA_28
Rad17
AAA_33
AAA_17
AAA_18
NPHP3_N
IstB_IS21
Mg_chelatase
Parvo_NS1
Nucleolin_bd
AAA_3
NB-ARC
TsaE
Bac_DnaA
NACHT
Viral_helicase1
ABC_tran
Cytidylate_kin2
AAA_11
TTC3_9th
Motif
Other DBs
NCBI-GeneID:
109804592
NCBI-ProteinID:
XP_020222036
LinkDB
All DBs
Position
8:complement(19660094..19665012)
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AA seq
767 aa
AA seq
DB search
MGRRNGGRSLQDTLRRRLESCKSKYSTAEQIANHLRSTYPDYHRTKHQTLIRFVQEALNS
TPSLNHSSDDDHEAQPPTASRKRRKRVDQSEERLQRIEALHVRRRLQTDSSSEEENVSSS
EDAIYGEKVEPQFDLMKTMLRKSYMPKKEKNVELEVGNSNKGTVTSTLMNEEGKEVRGSV
SNVDVKGNDWPRFRDLGGMKEVLEELKMEVIVPLYHPQLPRQLGVRPMAGILLHGPPGCG
KTKLAHAIANETGLPFYQISATEVVSGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIA
SKREDLQREMEKRIVTQLMTCMDQSNRLLQPENESEGSDGQHPGYVLVIGATNRPDAIDP
ALRRPGRFDREIIIGIADESAREEILSTLTNNLTTEGLFDLRKIAKDTAGYVGADLVALV
NKAGNLAMKRIIVGRRHDLSQDHMNEHAEDWWRVHWLPEEINKLAVKMSDFEEAVNMVQP
SLRRDGFSPIPDVKWEDVGGLDLLRQEFERYIVRRIKYPEDYEGLGIDLEMGFLLYGPPG
CGKTLIAKAVAHEAGANFIHVKGPSLLNKYVGESELAVRRMFSDARTCAPCIIFFDEVDA
LTTTRGKEGGWVIERLLNQLLIELDGAERRRGVFVIGATNRPEVMDRALLRPGRFGKLLY
VPLPSPDERVLILKALARKKCIDASVDLSAIAKMEACENLSGADLSALMNEAAMAVIDEK
ETLTDLTHYTRTIKRNHFEVALRKVSPSVSDRQKQYYQRLSQSFKAA
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgggaagaagaaacggtgggaggtctctgcaagacaccctccgtcgtcggcttgagtca
tgtaagtccaaatactccaccgccgaacaaatcgccaaccatctccgctccacttacccc
gactaccaccgaaccaagcaccaaaccctaattcgttttgttcaggaagctcttaactcc
actccctcgctcaaccattcttccgacgatgaccatgaagctcagcctccaaccgcctct
cgtaagcgccggaagagagtcgaccaaagcgaggagaggttgcagaggatcgaagccttg
cacgtgcgaaggaggctgcagaccgattcctcttcggaggaagaaaacgtctcgtcttcc
gaagacgcgatttacggggagaaggtggagcctcagtttgacttgatgaagacaatgctg
cgaaagtcgtatatgccgaagaaggagaagaacgtcgagttggaggtggggaatagcaat
aagggtactgtgactagcactcttatgaatgaggaagggaaggaagtcaggggttcggtt
tcgaatgttgatgtgaaggggaatgattggcctaggtttagggatttgggtgggatgaag
gaggtcttggaggagctgaagatggaagtgattgtgcctttgtatcatccccaattgcct
agacagttgggtgtgaggccgatggctggcattttgttgcatggaccacctggttgtggg
aagactaaacttgcacatgctatagctaatgagactggtcttcctttttatcagatttca
gctaccgaggtggtttctggagtctcgggtgcatcggaagaaaatattagagagcttttc
tctaaagcatacaggactgcaccatcaattgtctttattgatgagatcgatgcaattgca
tcaaagagagaggatttgcaacgtgagatggagaaacgaattgtgacacaattaatgact
tgcatggatcaatcaaataggcttcttcagccagaaaatgagtcagagggttctgatggt
caacatcctggctatgttcttgtaattggagctacaaataggcctgatgctattgaccct
gccctgagaaggcctggtcggtttgatcgtgagattattattggcattgctgatgaatct
gccagggaggagatcctttccacgcttactaacaatcttacaactgaaggtttatttgat
ctacggaaaatagccaaggatacggcaggatatgttggtgctgatttggtggctcttgtt
aacaaggctggtaatctggcaatgaagagaataattgttggaaggagacatgatttatct
caagatcacatgaacgagcatgctgaagactggtggagagtacattggttgcctgaagaa
ataaataagcttgccgtcaaaatgtctgattttgaggaagcagtcaacatggtgcaacct
tcgttaagaagagatgggttctctcctattcctgatgtgaaatgggaagacgtaggaggg
cttgatcttttaagacaggagtttgaacgttatattgtaaggcgtataaaatatcctgaa
gattatgagggacttgggatagatctcgagatgggatttttgctttatggacctcctggt
tgtggtaaaacgctgattgccaaagctgttgcccatgaggcaggggctaattttattcat
gttaagggaccttcacttctaaataaatatgttggagaaagcgaacttgcagttcgtaga
atgtttagcgatgcaaggacatgtgcaccttgtataatattttttgatgaggtggatgct
ttgacaaccacacgtggtaaagaaggtggttgggttattgaacgactgttgaatcagttg
cttattgagttagatggcgcagagcgaagacggggtgtttttgtgattggtgctacaaat
aggcctgaggtgatggatcgtgctctcctacggcctggtaggtttggtaagcttctttat
gttccacttccaagcccggatgagcgggttttgatattgaaagctcttgcaaggaagaag
tgtattgatgcctcagtagacttgagtgccatagccaaaatggaagcttgtgaaaaccta
agtggcgctgatctttctgcattgatgaacgaggctgcaatggctgtaattgatgagaaa
gaaaccttgaccgacttaacgcactatacaaggaccatcaagagaaatcattttgaggta
gcacttaggaaagtctctccgtctgtgtcagacaggcaaaaacagtactatcagcgcttg
tcacagagctttaaagcagcatga
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