Cajanus cajan (pigeon pea): 109804893
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Entry
109804893 CDS
T04868
Name
(RefSeq) protein RAE1 isoform X1
KO
K14298
mRNA export factor
Organism
ccaj
Cajanus cajan (pigeon pea)
Pathway
ccaj03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109804893
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccaj03019
]
109804893
03036 Chromosome and associated proteins [BR:
ccaj03036
]
109804893
Messenger RNA biogenesis [BR:
ccaj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109804893
Chromosome and associated proteins [BR:
ccaj03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
109804893
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
EIF3I
Beta-prop_EML
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
DUF7099
WD40_RFWD3
Beta-prop_Nup120_160
Vitelline_membr
Motif
Other DBs
NCBI-GeneID:
109804893
NCBI-ProteinID:
XP_020222399
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Position
9:complement(1998082..2005284)
Genome browser
AA seq
352 aa
AA seq
DB search
MSLPLTPSPVSVSVPKPTFWSPLHGTIRSFSSFPSFFTSFFNHFTSNQLLQVRCWEVARN
GVNVATVPKASITHDHPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPI
KELAWIPEMNLLVTASWDRTVKYWDTRQSNPVHTQQLPERCYAMTVKHPLMVVGTADRNL
IVYNLQNPQVEFKRIVSPLKYQTRCLAAFPDQQGFLVGSIEGRVGVHHLDDSQQGKNFTF
KCHREGNEIYSVNSLNFHPVHHTFATSGSDGAFNFWDKDSKQRLKAMLRCSQPIPCSTFN
NDGSIFAYSVCYDWSKGAENHNPATAKTYIFLHLPQESEVKGKPRIGATGRK
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcccactgactccgtctccagtctctgtttcagtcccaaagccaactttctgg
tcgccacttcatgggacaatcaggtctttctcttcgtttccctcttttttcacttcattc
ttcaaccatttcacttccaaccaacttttgcaggttcgttgctgggaggttgcgcggaat
ggagtaaatgtcgccactgtccccaaggcttctataacgcacgatcatccggttttgtgc
tctacgtggaaggatgatggcacaactgtcttctctggtggatgtgacaagcaagttaag
atgtggcctctattatcgggaggccaaccagtgactgttgccatgcatgatgcacccatc
aaagaacttgcttggattcctgagatgaaccttttggtcacagcaagctgggacaggact
gtcaaatactgggatacaaggcagtcaaatccagtgcacacacaacaactcccagagcgc
tgctatgctatgacagtgaaacatcctctgatggtcgttggcactgctgatagaaatctt
attgtttacaacctacaaaatcctcaggttgaattcaagagaatcgtttcaccattaaag
tatcaaacaaggtgccttgctgcattccctgatcaacaaggtttcttggttggatcaata
gaaggaagagttggtgtgcaccatttggatgatagtcagcagggtaaaaacttcactttt
aaatgccacagagaggggaatgaaatatactcggtcaactctttaaacttccatcctgta
caccacacatttgcaacttctggttctgatggtgctttcaatttttgggataaggatagt
aaacaaaggctcaaggccatgttaagatgcagccaacctattccttgcagtacattcaac
aatgatggttcaatatttgcatactcggtctgctatgactggagtaaaggggcagaaaat
cataatcctgcaacagcaaagacctacattttcttgcacttgcctcaggaatctgaggtt
aagggcaaaccacgcattggtgctactggtagaaagtag
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