Cajanus cajan (pigeon pea): 109805117
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Entry
109805117 CDS
T04868
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 53, mitochondrial
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
ccaj
Cajanus cajan (pigeon pea)
Brite
KEGG Orthology (KO) [BR:
ccaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccaj03009
]
109805117
03036 Chromosome and associated proteins [BR:
ccaj03036
]
109805117
Enzymes [BR:
ccaj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109805117
Ribosome biogenesis [BR:
ccaj03009
]
Eukaryotic type
Pre-60S particles
Helicases
109805117
Chromosome and associated proteins [BR:
ccaj03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
109805117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
109805117
NCBI-ProteinID:
XP_020222683
LinkDB
All DBs
Position
9:complement(2647218..2654624)
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AA seq
650 aa
AA seq
DB search
MTTLILRRSSSLLSRRFFAALASVQPLPHHRHGVSGDGVRSFHARSLPFSFRSSPVSRAP
QFALERDYSNDDEALGANGDEGLEIAKLGISPEIVDALAKRGIAKLFPIQRAVLEPAMQG
RDMIGRARTGTGKTLAFGIPILDRIIKFNAKHERGRDPLALVLAPTRELARQVEKEFIET
APNLDTICLYGGMPIQQQMRQLNYGVDIAVGTPGRIIDLLNRGALNLNSVQFVVLDEADQ
MLQVGFQEDVEKILERLSPNRQTLMFSATMPSWIMSITRNYLNNPLTIDLVGDSDQKLAD
GISLYSIVSDLYTKAGILAPLITEHANGGKCIVFTQTKRDADRLSYIMAKSLRCEALHGD
ISQTQRERTLAGFRNNNFNVLVATDVASRGLDIPNVDLVIHYDLPNSSEIFVHRSGRTGR
AGKKGAAILVYSEDQFRAVKTIERDVGCKFTELPKIDVPSGSAEMFGGMGGGNFGPFGGM
RDRQSRGSGFGRSPGFSRSGSYSNSGFGRSNYGNSSGMGRFGGPNSSHFGGPGSGQLGGS
SGNSSGEMGRYDGFGSGQAATQFGGNSFPDGFGGFGGSGQAGAQSGGNSHPGGFRGFGSS
DRYSSFGDFGQGQSGAFGDRKSSQSSSFGDSRGSGFGAFGNDNYNGGKSF
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgaccactctcattctccggagatcctcttccctactctcgcgccgcttcttcgccgct
ctcgcctccgtccagccgctcccgcaccaccgccacggtgtctccggcgacggagttagg
tcatttcacgccagatccctaccgttcagtttccgctcgtcgccggtctctcgcgcgccg
cagttcgccctagagcgcgattactctaacgatgatgaagctttaggcgccaacggcgac
gaaggactcgagatcgcgaagctcgggatctctccggagatcgtggatgctctggctaag
agaggaatcgcgaagctctttcccattcagagagctgtgctggaaccagctatgcaagga
cgtgatatgattggtcgagctagaactggaactgggaaaactcttgcttttgggataccc
atcttggacaggatcattaagtttaatgctaagcatgagcgaggaagggatcctttggct
ttggttttggctccaactagagaacttgcacggcaggttgagaaggagttcattgagact
gcacctaacttggacacaatctgtctttatgggggtatgcctatccagcaacaaatgagg
caacttaattatggtgtagatattgcagtaggcacacctggtcgaattattgatcttctc
aacaggggtgcactgaatttgaacagtgttcagtttgttgttcttgatgaagctgatcag
atgcttcaagtaggatttcaagaagatgtggagaagatcttggagaggttgtctccaaat
cgtcaaactcttatgttctcagcaacaatgccatcttggataatgagtattacccgcaat
tatctaaacaaccccctaaccattgatcttgttggagattcggatcagaagttggcagat
ggaatttcactgtactctattgtgtctgatctatacactaaagcaggaattctggcacct
ctgataactgaacatgcgaatggaggaaaatgtattgttttcacccaaaccaaacgtgat
gctgatcgattatcatatatcatggcaaaaagccttagatgtgaggccttgcatggagat
atttcacaaactcagagggaaaggactctcgctggcttcagaaacaacaattttaatgtt
ttagtagcaactgatgttgcttcacgagggcttgatattccaaatgtggatctcgtaata
cattatgatcttcccaattcatcagagatatttgttcatcgatctggacgaacaggccgt
gctgggaagaaaggagctgctattcttgtttactcagaagatcaattcagggctgtgaag
actattgagcgtgatgttggatgcaaatttacagagctaccaaagattgatgttccaagt
ggatcagcagagatgtttggtgggatgggtggtggcaattttggcccttttggaggtatg
agggatcgtcaatctagaggttcaggttttggtcgcagtcctggatttagccgttctggg
agttacagtaactctggatttggtcgatctaactatggaaattccagtgggatgggaagg
tttggaggaccaaattctagccattttggcggccctggttcaggtcagttaggaggatct
tctggtaattcatctggtgaaatgggtagatatgatggcttcggttcaggtcaagcagca
actcaatttggaggaaattctttcccagatggttttggaggatttggtggttcaggtcaa
gcaggagctcaatctggtggaaattctcatccaggtggttttagaggatttggtagttca
gatcgatatagcagttttggagattttgggcaaggtcaatctggtgcatttggtgacaga
aagtctagccaaagcagcagctttggtgattcacgtggtagtggtttcggtgcttttggt
aatgacaattataatggaggaaagtcgttttaa
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